CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.scaffold_257000017
(
Physcomitrella patens
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
fgenesh1_pm.scaffold_257000017
T071008_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.scaffold_257000017
bZIP
44
92
DSKALRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARQQ
Links
Other
bZIP
family TFs
Other
Physcomitrella patens
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00022p00217850
Amborella trichopoda
AMTR_s00022p00217850
I
0.788
Ciclev10028428m.g
Citrus clementina
Ciclev10028428m.g
I
0.788
orange1.1g036039m.g
Citrus sinensis
orange1.1g036039m.g
I
0.788
gene03778-v1.0-hybrid
Fragaria vesca
gene03778-v1.0-hybrid
N
0.788
GLYMA02G30220
Glycine max
GLYMA02G30220
I
0.783
GLYMA10G11985
Glycine max
GLYMA10G11985
I
0.783
GLYMA12G30990
Glycine max
GLYMA12G30990
I
0.783
Lus10019543.g
Linum usitatissimum
Lus10019543.g
N
0.788
MTR_0126s0080
Medicago truncatula
MTR_0126s0080
I
0.788
GSMUA_AchrUn_randomG12130_001
Musa acuminata
GSMUA_AchrUn_randomG12130_001
I
0.783
estExt_gwp_gw1.C_1260170
Physcomitrella patens
estExt_gwp_gw1.C_1260170
N
0.790
fgenesh1_pg.scaffold_30000177
Physcomitrella patens
fgenesh1_pg.scaffold_30000177
N
0.805
SELMODRAFT_231160
Selaginella moellendorffii
SELMODRAFT_231160
N
0.802
SELMODRAFT_231344
Selaginella moellendorffii
SELMODRAFT_231344
I
0.790
GRMZM2G133331
Zea mays
GRMZM2G133331
N
0.784