Cagra.1671s0308 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.1671s0308 T071499_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtbZIP52
M06746_2.00 		Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a 		0.846 1.000
AtbZIP52
M06747_2.00 		Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_col_v31 		0.846 1.000
PK16335.1
M01157_2.00 		Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN		 PBM
Lambert et al.(2019)
pTH10187 		0.832 0.919
PK00315.1
M01153_2.00 		Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN		 PBM
Lambert et al.(2019)
pTH10085 		0.832 0.903
BZIP18
M01777_2.00 		Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN		 PBM
Weirauch et al.(2014)
pTH7316 		0.817 0.871
BZIP18
M06768_2.00 		Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a 		0.817 0.871
BZIP18
M06769_2.00 		Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP18_col_v31 		0.817 0.871
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1671s0308.1.p bZIP 147 208

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_ABR089C Ashbya gossypii AGOS_ABR089C I 0.000
CaO19.12215 Candida albicans CaO19.12215 I 0.000
CaO19.4752 Candida albicans CaO19.4752 D 0.000
CD36_08440 Candida dubliniensis CD36_08440 I 0.000
CAGL0M13189g Candida glabrata CAGL0M13189g D 0.000
PGUG_01635 Candida guilliermondii PGUG_01635 I 0.000
CLUG_01356 Candida lusitaniae CLUG_01356 I 0.000
CORT_0A05380 Candida orthopsilosis CORT_0A05380 I 0.000
CANTEDRAFT_134781 Candida tenuis CANTEDRAFT_134781 I 0.000
CTRG_03253 Candida tropicalis CTRG_03253 I 0.000
CLUG_01356 Clavispora lusitaniae CLUG_01356 I 0.000
DEHA2A08382g Debaryomyces hansenii DEHA2A08382g I 0.000
Ecym_2301 Eremothecium cymbalariae Ecym_2301 I 0.000
KAFR_0F02070 Kazachstania africana KAFR_0F02070 I 0.000
LELG_00530 Lodderomyces elongisporus LELG_00530 I 0.000
PGUG_01635 Meyerozyma guilliermondii PGUG_01635 I 0.000
GNLVRS01_PISO0E05768g Millerozyma farinosa GNLVRS01_PISO0E05768g I 0.000
GNLVRS01_PISO0F07089g Millerozyma farinosa GNLVRS01_PISO0F07089g I 0.000
NCAS_0A12910 Naumovozyma castellii NCAS_0A12910 I 0.000
fgenesh1_pg.C_chr_7.1000062 Pichia stipitis fgenesh1_pg.C_chr_7.1000062 I 0.000
Scas_Contig709.32 Saccharomyces castellii Scas_Contig709.32 I 0.000
AACERI_AaceriABR089C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR089C I 0.000
PICST_33273 Scheffersomyces stipitis PICST_33273 I 0.000
TBLA_0G01920 Tetrapisispora blattae TBLA_0G01920 I 0.000
TPHA_0N01460 Tetrapisispora phaffii TPHA_0N01460 I 0.000
Kpol_1013p21 Vanderwaltozyma polyspora Kpol_1013p21 I 0.000
BN7_2125 Wickerhamomyces ciferrii BN7_2125 I 0.000