CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.2795s0001
(
Capsella grandiflora
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cagra.2795s0001
T071511_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP60
M00855_2.00
Arabidopsis thaliana
TGACGTSR
YSACGTCA
PBM
Franco-Zorrilla et al.(2014)
bZIP60
0.840
0.938
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.2795s0001.1.p
bZIP
144
207
DAGAKKRRRRVRNRDAAVRSRERKKEYVQDLEKKSKYLERECLRLGRMLECFVAENQSLRYCLQ
Links
Other
bZIP
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA007025
Anopheles arabiensis
AARA007025
N
ACHR000845
Anopheles christyi
ACHR000845
N
ACOM023683
Anopheles coluzzii
ACOM023683
N
AMEC019726
Anopheles melas
AMEC019726
N
AQUA007204
Anopheles quadriannulatus
AQUA007204
N
ASTEI08718
Anopheles stephensi
ASTEI08718
N