CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Carubv10001471m.g
(
Capsella rubella
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Carubv10001471m.g
T071543_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10001471m
bZIP
162
224
NDLKRIRRMYSNRESARRSRRRKQEYLVDLESQVDSLKGENSTLYKQLIDATQQFRSAGTNNR
Links
Other
bZIP
family TFs
Other
Capsella rubella
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ca01212
Panicum virgatum
Pavir.Ca01212
N
0.000
Pavir.Ga00772
Panicum virgatum
Pavir.Ga00772
N
0.000
Si007873m.g
Setaria italica
Si007873m.g
N
0.000
Sb01g029290
Sorghum bicolor
Sb01g029290
N
0.000
Sb09g003300
Sorghum bicolor
Sb09g003300
N
0.000
Sb10g005020
Sorghum bicolor
Sb10g005020
I
0.000
Sb10g007420
Sorghum bicolor
Sb10g007420
N
0.000
Sb10g009580
Sorghum bicolor
Sb10g009580
I
0.000
Sb10g009650
Sorghum bicolor
Sb10g009650
N
0.000
AC199820.4_FG006
Zea mays
AC199820.4_FG006
N
0.000
AC232321.1_FG008
Zea mays
AC232321.1_FG008
N
0.000
GRMZM2G121111
Zea mays
GRMZM2G121111
I
0.000