Carubv10006580m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10006580m.g T071556_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24978.1
M01162_2.00 		Cannabis sativa
NNNCACGTRTHNNNN
NNNNDAYACGTGNNN		 PBM
Lambert et al.(2019)
pTH10153 		0.784 0.684
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10006580m bZIP 209 271

Links

Other bZIP family TFs
Other Capsella rubella TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FD Arabidopsis lyrata Al_scaffold_0007_453 I 0.803
BZIP27 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3003160 I 0.833
ATBZIP27 Arabidopsis thaliana AT2G17770 I 0.802
FD Arabidopsis thaliana AT4G35900 I 0.803
PK24978.1 Cannabis sativa PK24978.1 D 0.784
Cla009066 Citrullus lanatus Cla009066 I 0.785
Thhalv10023128m.g Eutrema salsugineum Thhalv10023128m.g N 0.829
gene14556-v1.0-hybrid Fragaria vesca gene14556-v1.0-hybrid I 0.785
Gorai.007G191800 Gossypium raimondii Gorai.007G191800 I 0.784
MDP0000169473 Malus domestica MDP0000169473 N 0.800
TCM_000152 Theobroma cacao TCM_000152 I 0.784