CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

evm.TU.supercontig_538.1 *(Carica papaya)* bZIP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00170 (bZIP_1)	IPR011616	evm.TU.supercontig_538.1	T071782_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BZIP53 M06779_2.00	Arabidopsis thaliana	DNWGMTGACGTGKCV	BGMCACGTCAKCWNH	Dap-seq OMalley et al.(2016) bZIP53_colamp_a	0.825	0.556
BZIP53 M06780_2.00	Arabidopsis thaliana	DDWGMTGACGTGGMV	BKCCACGTCAKCWHH	Dap-seq OMalley et al.(2016) bZIP53_col	0.825	0.556
ATBZIP42 M06775_2.00	Arabidopsis thaliana	TGCTGACGTGGM	KCCACGTCAGCA	Dap-seq OMalley et al.(2016) bZIP42_col_a	0.820	0.556
ATBZIP42 M06776_2.00	Arabidopsis thaliana	TGCTGACGTGGCV	BGCCACGTCAGCA	Dap-seq OMalley et al.(2016) bZIP42_colamp_a	0.820	0.556
OS02G0728001 M01826_2.00	Oryza sativa	NHCACGTGKNN	NNMCACGTGDN	PBM Weirauch et al.(2014) pTH8334	0.798	0.492
OS02G0728001 M01827_2.00	Oryza sativa	WSACGTGG	CCACGTSW	PBM Weirauch et al.(2014) pTH8737	0.798	0.492
For this family, TFs with SR scores > 0.782* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
evm.model.supercontig_538.1	bZIP	27	89	MDQRKRKRMISNRESARRSRMRKQKHLDDLMSQVSQLRKENHQIITSVNITTQHYLNIESENS

Links
Other bZIP family TFs
Other *Carica papaya* TFs