gene23487-v1.0-hybrid (Fragaria vesca)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 gene23487-v1.0-hybrid T071845_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20942.1
M01159_2.00 		Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN		 PBM
Lambert et al.(2019)
pTH11276 		0.919 0.968
AT1G06070
M06744_2.00 		Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP69_col_a 		0.885 0.935
AT1G06070
M06745_2.00 		Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP69_colamp_a 		0.885 0.935
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna23487.1-v1.0-hybrid bZIP 228 289

Links

Other bZIP family TFs
Other Fragaria vesca TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_13434 Aegilops tauschii F775_13434 I 0.816
F775_32059 Aegilops tauschii F775_32059 I 0.788
Aquca_006_00159 Aquilegia coerulea Aquca_006_00159 I 0.788
Aquca_058_00063 Aquilegia coerulea Aquca_058_00063 I 0.828
Al_scaffold_0007_76 Arabidopsis lyrata Al_scaffold_0007_76 I 0.795
scaffold_100594.1 Arabidopsis lyrata scaffold_100594.1 I 0.900
AT1G06070 Arabidopsis thaliana AT1G06070 D 0.885
AT4G38900 Arabidopsis thaliana AT4G38900 I 0.812
Bostr.25219s0353 Boechera stricta Bostr.25219s0353 I 0.900
Bostr.25542s0069 Boechera stricta Bostr.25542s0069 I 0.812
BRADI3G41980 Brachypodium distachyon BRADI3G41980 I 0.788
BRADI5G14497 Brachypodium distachyon BRADI5G14497 I 0.815
Bo3g149620 Brassica oleracea Bo3g149620 I 0.805
Bo5g007170 Brassica oleracea Bo5g007170 I 0.888
Bo7g119550 Brassica oleracea Bo7g119550 I 0.812
Bo8g005940 Brassica oleracea Bo8g005940 I 0.900
Bra010722 Brassica rapa Bra010722 I 0.812
Bra015471 Brassica rapa Bra015471 I 0.888
Bra030637 Brassica rapa Bra030637 I 0.888
Bra033582 Brassica rapa Bra033582 I 0.812
PK00843.1 Cannabis sativa PK00843.1 I 0.812
PK20942.1 Cannabis sativa PK20942.1 D 0.919
Cagra.1671s0236 Capsella grandiflora Cagra.1671s0236 I 0.900
Carubv10008993m.g Capsella rubella Carubv10008993m.g I 0.900
evm.TU.supercontig_150.7 Carica papaya evm.TU.supercontig_150.7 I 0.812
evm.TU.supercontig_81.160 Carica papaya evm.TU.supercontig_81.160 I 0.797
Ca_02692 Cicer arietinum Ca_02692 I 0.895
Ca_27693 Cicer arietinum Ca_27693 I 0.812
Cla016124 Citrullus lanatus Cla016124 I 0.812
Cla016125 Citrullus lanatus Cla016125 I 0.812
Cla022201 Citrullus lanatus Cla022201 I 0.856
Cla022204 Citrullus lanatus Cla022204 I 0.855
Ciclev10028062m.g Citrus clementina Ciclev10028062m.g I 0.812
orange1.1g007579m.g Citrus sinensis orange1.1g007579m.g I 0.812
Cucsa.062530 Cucumis sativus Cucsa.062530 I 0.918
Cucsa.251880 Cucumis sativus Cucsa.251880 I 0.900
Cucsa.382180 Cucumis sativus Cucsa.382180 I 0.812
Cucsa.382190 Cucumis sativus Cucsa.382190 I 0.812
Eucgr.D00737 Eucalyptus grandis Eucgr.D00737 I 0.907
Eucgr.I01335 Eucalyptus grandis Eucgr.I01335 I 0.812
Thhalv10007692m.g Eutrema salsugineum Thhalv10007692m.g I 0.900
Thhalv10024895m.g Eutrema salsugineum Thhalv10024895m.g I 0.812
gene01680-v1.0-hybrid Fragaria vesca gene01680-v1.0-hybrid I 0.793
GLYMA04G02850 Glycine max GLYMA04G02850 I 0.792
GLYMA11G11791 Glycine max GLYMA11G11791 I 0.812
GLYMA11G13510 Glycine max GLYMA11G13510 I 0.919
GLYMA12G04050 Glycine max GLYMA12G04050 I 0.812
GLYMA12G05520 Glycine max GLYMA12G05520 I 0.919
GLYMA13G42030 Glycine max GLYMA13G42030 I 0.895
GLYMA15G03350 Glycine max GLYMA15G03350 I 0.895
Gorai.001G243800 Gossypium raimondii Gorai.001G243800 I 0.812
Gorai.005G015900 Gossypium raimondii Gorai.005G015900 I 0.917
Gorai.005G248900 Gossypium raimondii Gorai.005G248900 I 0.812
Gorai.006G229500 Gossypium raimondii Gorai.006G229500 I 0.899
Gorai.011G140400 Gossypium raimondii Gorai.011G140400 I 0.904
MLOC_64362 Hordeum vulgare MLOC_64362 I 0.827
MLOC_64781 Hordeum vulgare MLOC_64781 I 0.905
MLOC_75510 Hordeum vulgare MLOC_75510 I 0.788
Lus10008150.g Linum usitatissimum Lus10008150.g I 0.856
Lus10018061.g Linum usitatissimum Lus10018061.g I 0.812
Lus10019376.g Linum usitatissimum Lus10019376.g I 0.911
Lus10042057.g Linum usitatissimum Lus10042057.g I 0.812
chr3.CM0106.340.nd Lotus japonicus chr3.CM0106.340.nd I 0.895
MDP0000234166 Malus domestica MDP0000234166 I 0.807
MDP0000435971 Malus domestica MDP0000435971 I 0.851
cassava30160.valid.m1 Manihot esculenta cassava30160.valid.m1 I 0.812
cassava32399.m1 Manihot esculenta cassava32399.m1 I 0.919
cassava38273.valid.m1 Manihot esculenta cassava38273.valid.m1 I 0.812
cassava43164.valid.m1 Manihot esculenta cassava43164.valid.m1 I 0.919
MTR_4g072090 Medicago truncatula MTR_4g072090 I 0.812
mgf000302m Mimulus guttatus mgf000302m I 0.812
mgf004912m Mimulus guttatus mgf004912m I 0.812
GSMUA_Achr11G14990_001 Musa acuminata GSMUA_Achr11G14990_001 I 0.822
GSMUA_Achr3G12290_001 Musa acuminata GSMUA_Achr3G12290_001 I 0.812
GSMUA_Achr5G25700_001 Musa acuminata GSMUA_Achr5G25700_001 I 0.821
GSMUA_Achr8G12090_001 Musa acuminata GSMUA_Achr8G12090_001 I 0.790
GSMUA_AchrUn_randomG00680_001 Musa acuminata GSMUA_AchrUn_randomG00680_001 I 0.822
OB09G23080 Oryza brachyantha OB09G23080 I 0.905
OGLUM09G17020 Oryza glumaepatula OGLUM09G17020 I 0.905
BGIOSGA029105 Oryza indica BGIOSGA029105 I 0.788
BGIOSGA029106 Oryza indica BGIOSGA029106 I 0.788
OMERI09G12160 Oryza meridionalis OMERI09G12160 I 0.905
RF2A Oryza sativa OS09G0516200 I 0.905
PDK_20s1312701g003 Phoenix dactylifera PDK_20s1312701g003 I 0.798
e_gw1.20.99.1 Physcomitrella patens e_gw1.20.99.1 I 0.794
estExt_gwp_gw1.C_200078 Physcomitrella patens estExt_gwp_gw1.C_200078 I 0.794
estExt_gwp_gw1.C_5120003 Physcomitrella patens estExt_gwp_gw1.C_5120003 I 0.820
gw1.20.225.1 Physcomitrella patens gw1.20.225.1 I 0.820
POPTR_0004s17080 Populus trichocarpa POPTR_0004s17080 I 0.812
POPTR_0009s12830 Populus trichocarpa POPTR_0009s12830 I 0.812
POPTR_0017s05610 Populus trichocarpa POPTR_0017s05610 I 0.919
Pm007522 Prunus mume Pm007522 I 0.851
SapurV1A.0091s0130 Salix purpurea SapurV1A.0091s0130 I 0.812
SapurV1A.0379s0290 Salix purpurea SapurV1A.0379s0290 I 0.812
SELMODRAFT_129846 Selaginella moellendorffii SELMODRAFT_129846 I 0.822
SELMODRAFT_34663 Selaginella moellendorffii SELMODRAFT_34663 I 0.822
SELMODRAFT_77868 Selaginella moellendorffii SELMODRAFT_77868 I 0.822
Si015587m.g Setaria italica Si015587m.g I 0.790
Solyc01g110480.2 Solanum lycopersicum Solyc01g110480.2 I 0.812
Solyc06g053350.2 Solanum lycopersicum Solyc06g053350.2 I 0.883
PGSC0003DMG400001659 Solanum tuberosum PGSC0003DMG400001659 I 0.812
Sb06g021350 Sorghum bicolor Sb06g021350 I 0.820
Sb07g025490 Sorghum bicolor Sb07g025490 I 0.790
TCM_006766 Theobroma cacao TCM_006766 I 0.812
TCM_019998 Theobroma cacao TCM_019998 I 0.919
Traes_2AL_FA1957F59 Triticum aestivum Traes_2AL_FA1957F59 I 0.827
Traes_7BS_7B68879A9 Triticum aestivum Traes_7BS_7B68879A9 I 0.788
Traes_7DS_3463CAE33 Triticum aestivum Traes_7DS_3463CAE33 I 0.788
Traes_7DS_47B5A7FFF Triticum aestivum Traes_7DS_47B5A7FFF I 0.846
TRIUR3_16287 Triticum urartu TRIUR3_16287 I 0.858
TRIUR3_31242 Triticum urartu TRIUR3_31242 I 0.788
VIT_03s0038g00860 Vitis vinifera VIT_03s0038g00860 I 0.812
VIT_05s0102g01120 Vitis vinifera VIT_05s0102g01120 I 0.919
GRMZM2G332294 Zea mays GRMZM2G332294 I 0.783