CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.008G065300
(
Gossypium raimondii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Gorai.008G065300
T071946_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP53
M06779_2.00
Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH
Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a
0.794
0.548
BZIP53
M06780_2.00
Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP53_col
0.794
0.548
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.008G065300.1
bZIP
59
120
DERKRKRMLSNRESARRSRMRKQKHLDDLMAQVSDLTNHNNQILTSINVTTQLYSNVEAENL
Links
Other
bZIP
family TFs
Other
Gossypium raimondii
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BZO2H1
Arabidopsis lyrata
fgenesh2_kg.6__3429__AT4G02640.2
N
0.000
BZO2H1
Arabidopsis thaliana
AT4G02640
N
0.000
Bostr.2983s0195
Boechera stricta
Bostr.2983s0195
N
0.000
Bo9g005970
Brassica oleracea
Bo9g005970
N
0.000
Cagra.0635s0017
Capsella grandiflora
Cagra.0635s0017
N
0.000
Carubv10001050m.g
Capsella rubella
Carubv10001050m.g
N
0.000
Thhalv10028688m.g
Eutrema salsugineum
Thhalv10028688m.g
N
0.000