xbp1.L (Xenopus laevis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 XB-GENE-487128 T073057_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
XBP1
M02825_2.00 		Homo sapiens
GVTGACGTCABB
VVTGACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_1 		0.857 0.859
XBP1
M02826_2.00 		Homo sapiens
GVTGACGTGKCVHW
WDBGMCACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_2 		0.857 0.859
XBP1
M02730_2.00 		Homo sapiens
GACGTGKCNNW
WNNGMCACGTC		 SELEX
Jolma et al.(2010)
XBP1_monomer 		0.857 0.859
XBP1
M04231_2.00 		Homo sapiens
NVTGACGTGKNN
NNMCACGTCABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_1 		0.857 0.859
XBP1
M04232_2.00 		Homo sapiens
NVTKACGTMABV
BVTKACGTMABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_2 		0.857 0.859
XBP1
M04010_2.00 		Homo sapiens
GRTGACGTGKCV
BGMCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.1 		0.857 0.859
XBP1
M04011_2.00 		Homo sapiens
GRTGACGTCAYS
SRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.2 		0.857 0.859
XBP1
M04012_2.00 		Homo sapiens
KGMCACGTGKMCH
DGKMCACGTGKCM		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.3 		0.857 0.859
XBP1
M09932_2.00 		Homo sapiens
NHNWDHRVTGACGTGKHNHWDDHB
VDHHWDNDMCACGTCABYDHWNDN		 Transfac
Matys et al.(2006)
V$HTF_01 		0.857 0.859
XBP1
M09933_2.00 		Homo sapiens
DBRHTKACGTGKHNHWD
HWDNDMCACGTMADYVH		 Transfac
Matys et al.(2006)
V$XBP1_01 		0.857 0.859
XBP1
M04233_2.00 		Homo sapiens
BKMCACRTCAYS
SRTGAYGTGKMV		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_1 		0.857 0.859
XBP1
M04234_2.00 		Homo sapiens
VVTGWCRTCAYS
SRTGAYGWCABB		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_2 		0.857 0.859
Xbp1
M00757_2.00 		Mus musculus
NNHBAYDNNN
NNNHRTVDNN		 PBM
Weirauch et al.(2013)
pTH2852 		0.857 0.844
Xbp1
M01802_2.00 		Mus musculus
NHNACGYNN
NNRCGTNDN		 PBM
Weirauch et al.(2014)
pTH5019 		0.857 0.844
Xbp1
M08818_2.00 		Mus musculus
GACGTGKCMHWD
HWDKGMCACGTC		 Misc
Kulakovskiy et al.(2013)
XBP1_MOUSE.H11MO.0.C 		0.857 0.844
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH43852 bZIP 55 118
AAI10724 bZIP 55 118
AAK48906 bZIP 55 118

Links

Other bZIP family TFs
Other Xenopus laevis TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCOA3 Anolis carolinensis ENSACAG00000016334 N
Afo_R002527 Aptenodytes forsteri Afo_R002527 N
ENSAMXG00000008788 Astyanax mexicanus ENSAMXG00000008788 N
Brh_R004714 Buceros rhinoceros Brh_R004714 N
NCOA3 Callithrix jacchus ENSCJAG00000016602 N
Aan_R015846 Calypte anna Aan_R015846 N
Cmyd_10017429 Chelonia mydas Cmyd_10017429 N
ENSCSAG00000014910 Chlorocebus sabaeus ENSCSAG00000014910 N
ENSFALG00000012895 Ficedula albicollis ENSFALG00000012895 N
ENSGMOG00000014139 Gadus morhua ENSGMOG00000014139 N
NCOA3 Gallus gallus ENSGALG00000004570 N
NCOA3 Gasterosteus aculeatus ENSGACG00000015221 N
Gfo_R009610 Geospiza fortis Gfo_R009610 N
ENSGGOG00000002127 Gorilla gorilla ENSGGOG00000002127 N
ENSGGOG00000025131 Gorilla gorilla ENSGGOG00000025131 N
NCOA3 Homo sapiens ENSG00000124151 N
ENSLACG00000006885 Latimeria chalumnae ENSLACG00000006885 N
ENSMMUP00000015773 Macaca fascicularis ENSMMUP00000015773 N
NCOA3 Macaca mulatta ENSMMUG00000012020 N
NCOA3 Meleagris gallopavo ENSMGAG00000004414 N
NCOA3 Microcebus murinus ENSMICG00000006798 N
ENSNLEG00000006923 Nomascus leucogenys ENSNLEG00000006923 N
ENSONIG00000017075 Oreochromis niloticus ENSONIG00000017075 N
NCOA3 Ornithorhynchus anatinus ENSOANG00000012027 N
NCOA3 Oryzias latipes ENSORLG00000012143 N
NCOA3 Pan troglodytes ENSPTRG00000013592 N
ENSPANG00000001325 Papio anubis ENSPANG00000001325 N
ENSPSIG00000011898 Pelodiscus sinensis ENSPSIG00000011898 N
ENSPPYG00000011103 Pongo abelii ENSPPYG00000011103 N
NCOA3 Taeniopygia guttata ENSTGUG00000008993 N
NCOA3 Takifugu rubripes ENSTRUG00000004450 N
Tal_R011643 Tyto alba Tal_R011643 N
ncoa3.S Xenopus laevis XB-GENE-865628 N
ncoa3 Xenopus tropicalis XB-GENE-486618 N
XP_002933204 Xenopus tropicalis XP_002933204 N
ENSXMAG00000017470 Xiphophorus maculatus ENSXMAG00000017470 N