CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALNC14_012910
(
Albugo laibachii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ALNC14_012910
T080647_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra42912
M01181_2.00
Phytophthora ramorum
RCSCATCHYN
NRDGATGSGY
PBM
Lambert et al.(2019)
pTH11167
0.781
0.884
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCA15148
C2H2 ZF
129
153
FMCPEIHCGKQFPRSFALRRHMRIH
CCA15148
C2H2 ZF
159
183
YRCDYEGCTQCFNTSGNLSRHKRIH
CCA15148
C2H2 ZF
189
213
YPCIVPSCEKRFNTSTKLKRHMRSH
Links
Other
C2H2 ZF
family TFs
Other
Albugo laibachii
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPBR_04582
Sporothrix brasiliensis
SPBR_04582
N