IDD2 (Arabidopsis thaliana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AT3G50700 T080860_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IDD2
M01061_2.00		 Arabidopsis thaliana
NHTTGTHNNN
NNNDACAADN		 PBM
Sullivan et al.(2014)
pTH7537		 (Direct) (Direct)
IDD2
M06815_2.00		 Arabidopsis thaliana
TTTTGTCKTTTWVYD
HRBWAAAMGACAAAA		 Dap-seq
OMalley et al.(2016)
IDD2_col_a		 (Direct) (Direct)
IDD2
M06816_2.00		 Arabidopsis thaliana
NNNTTTTGTCKTHTWNBD
HVNWADAMGACAAAANNN		 Dap-seq
OMalley et al.(2016)
IDD2_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IDD9
M01060_2.00 		Arabidopsis thaliana
NNNHRDHNNN
NNNDHYDNNN		 PBM
Sullivan et al.(2014)
pTH7162 		0.768 0.924
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01061_2.00 C2H2 ZF 51 73
M01061_2.00 C2H2 ZF 127 148
M01061_2.00 C2H2 ZF 147 173

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G50700.1 C2H2 ZF 63 85
AT3G50700.1 C2H2 ZF 139 160
AT3G50700.1 C2H2 ZF 159 185

Links

Other C2H2 ZF family TFs
Other Arabidopsis thaliana TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ac Drosophila erecta FBgn0028822 I
ac Drosophila melanogaster FBgn0000022 D
ac Drosophila yakuba FBgn0022828 I