BGIOSGA004768 (Oryza indica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BGIOSGA004768 T081496_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.780 0.761
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.779 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.779 0.761
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.769 0.696
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.769 0.696
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.759 0.674
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.758 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA004768-PA C2H2 ZF 43 65
BGIOSGA004768-PA C2H2 ZF 92 114

Links

Other C2H2 ZF family TFs
Other Oryza indica TFs

381 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g08834 Acanthocheilonema viteae nAv.1.0.1.g08834 N
ACYPI003006 Acyrthosiphon pisum ACYPI003006 I
ANCCAN_04319 Ancylostoma caninum ANCCAN_04319 I
ANCCEY_00577 Ancylostoma ceylanicum ANCCEY_00577 I
ANCDUO_12144 Ancylostoma duodenale ANCDUO_12144 N
ACAC_0001093601 Angiostrongylus cantonensis ACAC_0001093601 I
ACOC_0000846801 Angiostrongylus costaricensis ACOC_0000846801 I
ASIM_0001377801 Anisakis simplex ASIM_0001377801 N
AGAP010201 Anopheles gambiae AGAP010201 I
GB48999 Apis mellifera GB48999 I
ASU_09033 Ascaris suum ASU_09033 N
BGIBMGA010353 Bombyx mori BGIBMGA010353 I
Bm4538 Brugia malayi Bm4538 N
BTMF_0001307601 Brugia timori BTMF_0001307601 N
CBN22234 Caenorhabditis brenneri CBN22234 I
CBG10034 Caenorhabditis briggsae CBG10034 I
hlh-11 Caenorhabditis elegans WBGene00001955 D
CJA09019 Caenorhabditis japonica CJA09019 I
CRE25281 Caenorhabditis remanei CRE25281 I
CGOC_0000858101 Cylicostephanus goldi CGOC_0000858101 I
KGM_15765 Danaus plexippus KGM_15765 I
DICVIV_02775 Dictyocaulus viviparus DICVIV_02775 I
nDi.2.2.2.g07826 Dirofilaria immitis nDi.2.2.2.g07826 N
GF21721 Drosophila ananassae FBgn0098721 I
GG24179 Drosophila erecta FBgn0116312 I
GH10096 Drosophila grimshawi FBgn0117577 I
crp Drosophila melanogaster FBgn0001994 D
GI14377 Drosophila mojavensis FBgn0137129 I
GL14101 Drosophila persimilis FBgn0151706 I
GA20511 Drosophila pseudoobscura FBgn0080505 I
GM17917 Drosophila sechellia FBgn0172824 I
GD21926 Drosophila simulans FBgn0193342 I
GJ16254 Drosophila virilis FBgn0203439 I
GK24289 Drosophila willistoni FBgn0226250 I
GE19372 Drosophila yakuba FBgn0236717 I
EEL_0000428401 Elaeophora elaphi EEL_0000428401 N
GPUH_0001027101 Gongylonema pulchrum GPUH_0001027101 N
HCOI01121900 Haemonchus contortus HCOI01121900 I
HMEL008759 Heliconius melpomene HMEL008759 I
HPBE_0002474001 Heligmosomoides bakeri HPBE_0002474001 I
nLs.2.1.2.g06012 Litomosoides sigmodontis nLs.2.1.2.g06012 N
LOAG_07256 Loa loa LOAG_07256 N
LLOJ009485 Lutzomyia longipalpis LLOJ009485 I
NECAME_04511 Necator americanus NECAME_04511 I
NBR_0000263101 Nippostrongylus brasiliensis NBR_0000263101 I
NBR_0000299801 Nippostrongylus brasiliensis NBR_0000299801 I
nOo.2.0.1.g02551 Onchocerca ochengi nOo.2.0.1.g02551 N
WBGene00244598 Onchocerca volvulus WBGene00244598 N
scaffold60-EXSNAP2012.12 Pristionchus exspectatus scaffold60-EXSNAP2012.12 I
PPA14541 Pristionchus pacificus PPA14541 I
SVUK_0000451101 Strongylus vulgaris SVUK_0000451101 I
TELCIR_07248 Teladorsagia circumcincta TELCIR_07248 I
TELCIR_11314 Teladorsagia circumcincta TELCIR_11314 I
TCNE_0001886101 Toxocara canis TCNE_0001886101 N
L798_07621 Zootermopsis nevadensis L798_07621 I