BRADI2G54500 (Brachypodium distachyon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BRADI2G54500 T082008_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.780 0.761
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.779 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.779 0.761
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.769 0.696
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.769 0.696
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.759 0.674
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.757 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G54500.1 C2H2 ZF 58 80
BRADI2G54500.1 C2H2 ZF 108 130

Links

Other C2H2 ZF family TFs
Other Brachypodium distachyon TFs

401 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_08136 Aegilops tauschii F775_08136 N
F775_28196 Aegilops tauschii F775_28196 N
AMTR_s00002p00211460 Amborella trichopoda AMTR_s00002p00211460 N
AMTR_s00008p00208550 Amborella trichopoda AMTR_s00008p00208550 N
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N
Aquca_019_00150 Aquilegia coerulea Aquca_019_00150 N
Aquca_095_00049 Aquilegia coerulea Aquca_095_00049 N
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N
fgenesh2_kg.2__1947__AT1G76590.1 Arabidopsis lyrata fgenesh2_kg.2__1947__AT1G76590.1 N
fgenesh2_kg.7__2515__AT4G17900.1 Arabidopsis lyrata fgenesh2_kg.7__2515__AT4G17900.1 N
scaffold_102351.1 Arabidopsis lyrata scaffold_102351.1 N
AT1G21000 Arabidopsis thaliana AT1G21000 N
AT1G32700 Arabidopsis thaliana AT1G32700 N
AT1G76590 Arabidopsis thaliana AT1G76590 N
AT4G17900 Arabidopsis thaliana AT4G17900 N
Bostr.20129s0097 Boechera stricta Bostr.20129s0097 N
Bostr.30275s0258 Boechera stricta Bostr.30275s0258 N
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N
Bostr.7128s0691 Boechera stricta Bostr.7128s0691 N
BRADI1G35697 Brachypodium distachyon BRADI1G35697 N
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N
Bo1g018010 Brassica oleracea Bo1g018010 N
Bo5g030950 Brassica oleracea Bo5g030950 N
Bo5g049240 Brassica oleracea Bo5g049240 N
Bo6g084850 Brassica oleracea Bo6g084850 N
Bo6g120700 Brassica oleracea Bo6g120700 N
Bo7g059750 Brassica oleracea Bo7g059750 N
Bo7g105550 Brassica oleracea Bo7g105550 N
Bo8g028900 Brassica oleracea Bo8g028900 N
Bo8g070540 Brassica oleracea Bo8g070540 N
Bra003715 Brassica rapa Bra003715 N
Bra012263 Brassica rapa Bra012263 N
Bra012632 Brassica rapa Bra012632 N
Bra013266 Brassica rapa Bra013266 N
Bra015731 Brassica rapa Bra015731 N
Bra016441 Brassica rapa Bra016441 N
Bra021029 Brassica rapa Bra021029 N
Bra023280 Brassica rapa Bra023280 N
Bra025865 Brassica rapa Bra025865 N
Bra035494 Brassica rapa Bra035494 N
PK01309.1 Cannabis sativa PK01309.1 N
PK10752.1 Cannabis sativa PK10752.1 N
PK14253.1 Cannabis sativa PK14253.1 N
PK20928.1 Cannabis sativa PK20928.1 N
PK29286.1 Cannabis sativa PK29286.1 N
Cagra.2281s0027 Capsella grandiflora Cagra.2281s0027 N
Cagra.3356s0083 Capsella grandiflora Cagra.3356s0083 N
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N
Cagra.7414s0001 Capsella grandiflora Cagra.7414s0001 N
Carubv10005524m.g Capsella rubella Carubv10005524m.g N
Carubv10009696m.g Capsella rubella Carubv10009696m.g N
Carubv10009979m.g Capsella rubella Carubv10009979m.g N
Carubv10020852m.g Capsella rubella Carubv10020852m.g N
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N
evm.TU.supercontig_43.104 Carica papaya evm.TU.supercontig_43.104 N
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N
evm.TU.supercontig_71.62 Carica papaya evm.TU.supercontig_71.62 N
Ca_00735 Cicer arietinum Ca_00735 N
Ca_11235 Cicer arietinum Ca_11235 N
Ca_11505 Cicer arietinum Ca_11505 N
Ca_11837 Cicer arietinum Ca_11837 N
Ca_12361 Cicer arietinum Ca_12361 N
Cla008966 Citrullus lanatus Cla008966 N
Cla010408 Citrullus lanatus Cla010408 N
Cla016461 Citrullus lanatus Cla016461 N
Cla018029 Citrullus lanatus Cla018029 N
Ciclev10002292m.g Citrus clementina Ciclev10002292m.g N
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N
Ciclev10012756m.g Citrus clementina Ciclev10012756m.g N
Ciclev10030107m.g Citrus clementina Ciclev10030107m.g N
Ciclev10032089m.g Citrus clementina Ciclev10032089m.g N
orange1.1g025742m.g Citrus sinensis orange1.1g025742m.g N
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N
orange1.1g028382m.g Citrus sinensis orange1.1g028382m.g N
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N
Cucsa.313040 Cucumis sativus Cucsa.313040 N
Cucsa.318510 Cucumis sativus Cucsa.318510 N
Cucsa.321900 Cucumis sativus Cucsa.321900 N
Cucsa.378840 Cucumis sativus Cucsa.378840 N
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N
Eucgr.F01950 Eucalyptus grandis Eucgr.F01950 N
Eucgr.F03621 Eucalyptus grandis Eucgr.F03621 N
Thhalv10008598m.g Eutrema salsugineum Thhalv10008598m.g N
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N
Thhalv10019067m.g Eutrema salsugineum Thhalv10019067m.g N
Thhalv10026159m.g Eutrema salsugineum Thhalv10026159m.g N
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N
gene29145-v1.0-hybrid Fragaria vesca gene29145-v1.0-hybrid N
GLYMA01G02180 Glycine max GLYMA01G02180 N
GLYMA01G11390 Glycine max GLYMA01G11390 N
GLYMA01G44430 Glycine max GLYMA01G44430 N
GLYMA03G34530 Glycine max GLYMA03G34530 N
GLYMA08G36641 Glycine max GLYMA08G36641 N
GLYMA09G33770 Glycine max GLYMA09G33770 N
GLYMA10G07240 Glycine max GLYMA10G07240 N
GLYMA11G01100 Glycine max GLYMA11G01100 N
GLYMA11G11640 Glycine max GLYMA11G11640 N
GLYMA12G01890 Glycine max GLYMA12G01890 N
GLYMA13G21140 Glycine max GLYMA13G21140 N
GLYMA19G37220 Glycine max GLYMA19G37220 N
Gorai.003G056500 Gossypium raimondii Gorai.003G056500 N
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N
Gorai.004G184500 Gossypium raimondii Gorai.004G184500 N
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N
Gorai.013G184000 Gossypium raimondii Gorai.013G184000 N
MLOC_59330 Hordeum vulgare MLOC_59330 N
MLOC_63157 Hordeum vulgare MLOC_63157 N
MLOC_69202 Hordeum vulgare MLOC_69202 N
LPERR02G23300 Leersia perrieri LPERR02G23300 N
LPERR04G19240 Leersia perrieri LPERR04G19240 N
LPERR06G17910 Leersia perrieri LPERR06G17910 N
Lus10000482.g Linum usitatissimum Lus10000482.g N
Lus10000952.g Linum usitatissimum Lus10000952.g N
Lus10002700.g Linum usitatissimum Lus10002700.g N
Lus10004577.g Linum usitatissimum Lus10004577.g N
Lus10020337.g Linum usitatissimum Lus10020337.g N
Lus10023411.g Linum usitatissimum Lus10023411.g N
Lus10027735.g Linum usitatissimum Lus10027735.g N
Lus10030968.g Linum usitatissimum Lus10030968.g N
Lus10035554.g Linum usitatissimum Lus10035554.g N
Lus10040082.g Linum usitatissimum Lus10040082.g N
Lus10040292.g Linum usitatissimum Lus10040292.g N
chr1.CM0591.460.nd Lotus japonicus chr1.CM0591.460.nd N
chr3.CM0127.220.nc Lotus japonicus chr3.CM0127.220.nc N
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N
MDP0000133007 Malus domestica MDP0000133007 N
MDP0000133008 Malus domestica MDP0000133008 N
MDP0000225862 Malus domestica MDP0000225862 N
MDP0000553473 Malus domestica MDP0000553473 N
MDP0000570901 Malus domestica MDP0000570901 N
cassava13654.valid.m1 Manihot esculenta cassava13654.valid.m1 N
cassava13685.valid.m1 Manihot esculenta cassava13685.valid.m1 N
cassava15058.m1 Manihot esculenta cassava15058.m1 N
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N
cassava22380.valid.m1 Manihot esculenta cassava22380.valid.m1 N
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N
cassava7406.valid.m1 Manihot esculenta cassava7406.valid.m1 N
cassava9017.m1 Manihot esculenta cassava9017.m1 N
MTR_4g078170 Medicago truncatula MTR_4g078170 N
MTR_5g007230 Medicago truncatula MTR_5g007230 N
MTR_5g030130 Medicago truncatula MTR_5g030130 N
MTR_7g102790 Medicago truncatula MTR_7g102790 N
MTR_8g066820 Medicago truncatula MTR_8g066820 N
mgf002787m Mimulus guttatus mgf002787m N
mgf004069m Mimulus guttatus mgf004069m N
mgf006925m Mimulus guttatus mgf006925m N
mgf010773m Mimulus guttatus mgf010773m N
mgf023930m Mimulus guttatus mgf023930m N
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N
GSMUA_Achr6G36360_001 Musa acuminata GSMUA_Achr6G36360_001 N
GSMUA_Achr7G20650_001 Musa acuminata GSMUA_Achr7G20650_001 N
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N
GSMUA_Achr9G12280_001 Musa acuminata GSMUA_Achr9G12280_001 N
GSMUA_AchrUn_randomG24560_001 Musa acuminata GSMUA_AchrUn_randomG24560_001 N
OBART02G28660 Oryza barthii OBART02G28660 N
OBART04G23520 Oryza barthii OBART04G23520 N
OBART06G21430 Oryza barthii OBART06G21430 N
OB02G35810 Oryza brachyantha OB02G35810 N
OB04G30420 Oryza brachyantha OB04G30420 N
OB06G29400 Oryza brachyantha OB06G29400 N
OB10G26540 Oryza brachyantha OB10G26540 N
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N
ORGLA06G0177200 Oryza glaberrima ORGLA06G0177200 N
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N
OGLUM06G22610 Oryza glumaepatula OGLUM06G22610 N
BGIOSGA005806 Oryza indica BGIOSGA005806 N
BGIOSGA014451 Oryza indica BGIOSGA014451 N
BGIOSGA023292 Oryza indica BGIOSGA023292 N
OLONG_015674 Oryza longistaminata OLONG_015674 N
OLONG_023395 Oryza longistaminata OLONG_023395 N
OMERI01G31170 Oryza meridionalis OMERI01G31170 N
ONIVA02G31400 Oryza nivara ONIVA02G31400 N
ONIVA04G22750 Oryza nivara ONIVA04G22750 N
ONIVA06G25330 Oryza nivara ONIVA06G25330 N
OPUNC02G26310 Oryza punctata OPUNC02G26310 N
OPUNC04G21040 Oryza punctata OPUNC04G21040 N
OPUNC06G19460 Oryza punctata OPUNC06G19460 N
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N
ORUFI06G22980 Oryza rufipogon ORUFI06G22980 N
OS02G0692700 Oryza sativa OS02G0692700 N
OS04G0591100 Oryza sativa OS04G0591100 N
OS06G0624900 Oryza sativa OS06G0624900 N
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N
Pavir.Da00498 Panicum virgatum Pavir.Da00498 N
Pavir.Db00732 Panicum virgatum Pavir.Db00732 N
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N
e_gw1.35.314.1 Physcomitrella patens e_gw1.35.314.1 N
e_gw1.6.367.1 Physcomitrella patens e_gw1.6.367.1 N
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N
POPTR_0002s00430 Populus trichocarpa POPTR_0002s00430 N
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N
XM_002306973.1 Populus trichocarpa POPTR_0005s28040 N
POPTR_0006s12100 Populus trichocarpa POPTR_0006s12100 N
POPTR_0013s07610 Populus trichocarpa POPTR_0013s07610 N
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N
POPTR_0019s07790 Populus trichocarpa POPTR_0019s07790 N
Pm001175 Prunus mume Pm001175 N
Pm012470 Prunus mume Pm012470 N
Pm022874 Prunus mume Pm022874 N
Pm023220 Prunus mume Pm023220 N
Pm026291 Prunus mume Pm026291 N
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N
PRUPE_ppa011458mg Prunus persica PRUPE_ppa011458mg N
PRUPE_ppa011630mg Prunus persica PRUPE_ppa011630mg N
30054.m000824 Ricinus communis 30054.m000824 N
30073.m002298 Ricinus communis 30073.m002298 N
30078.m002228 Ricinus communis 30078.m002228 N
30170.m013811 Ricinus communis 30170.m013811 N
SapurV1A.0016s0060 Salix purpurea SapurV1A.0016s0060 N
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N
SapurV1A.0182s0280 Salix purpurea SapurV1A.0182s0280 N
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N
SapurV1A.0554s0100 Salix purpurea SapurV1A.0554s0100 N
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N
SapurV1A.1141s0070 Salix purpurea SapurV1A.1141s0070 N
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N
SapurV1A.1628s0020 Salix purpurea SapurV1A.1628s0020 N
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N
SELMODRAFT_116939 Selaginella moellendorffii SELMODRAFT_116939 N
SELMODRAFT_16399 Selaginella moellendorffii SELMODRAFT_16399 N
SELMODRAFT_26582 Selaginella moellendorffii SELMODRAFT_26582 N
SELMODRAFT_39612 Selaginella moellendorffii SELMODRAFT_39612 N
SELMODRAFT_410393 Selaginella moellendorffii SELMODRAFT_410393 N
SELMODRAFT_411504 Selaginella moellendorffii SELMODRAFT_411504 N
SELMODRAFT_69064 Selaginella moellendorffii SELMODRAFT_69064 N
SELMODRAFT_69065 Selaginella moellendorffii SELMODRAFT_69065 N
Si007136m.g Setaria italica Si007136m.g N
Si010911m.g Setaria italica Si010911m.g N
Si017318m.g Setaria italica Si017318m.g N
Solyc06g061240.2 Solanum lycopersicum Solyc06g061240.2 N
Solyc08g005100.2 Solanum lycopersicum Solyc08g005100.2 N
Solyc08g076860.2 Solanum lycopersicum Solyc08g076860.2 N
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N
PGSC0003DMG400007670 Solanum tuberosum PGSC0003DMG400007670 N
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N
PGSC0003DMG400009931 Solanum tuberosum PGSC0003DMG400009931 N
PGSC0003DMG400017518 Solanum tuberosum PGSC0003DMG400017518 N
PGSC0003DMG400017849 Solanum tuberosum PGSC0003DMG400017849 N
Sb04g031230 Sorghum bicolor Sb04g031230 N
Sb06g027000 Sorghum bicolor Sb06g027000 N
Sb10g024575 Sorghum bicolor Sb10g024575 N
TCM_015701 Theobroma cacao TCM_015701 N
TCM_022356 Theobroma cacao TCM_022356 N
TCM_025548 Theobroma cacao TCM_025548 N
TCM_034802 Theobroma cacao TCM_034802 N
Traes_2AL_74EFA5757 Triticum aestivum Traes_2AL_74EFA5757 N
Traes_2BL_69847FCA6 Triticum aestivum Traes_2BL_69847FCA6 N
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N
Traes_7AL_0D6795125 Triticum aestivum Traes_7AL_0D6795125 N
Traes_7BL_694F67827 Triticum aestivum Traes_7BL_694F67827 N
Traes_7DL_3547B7B9A Triticum aestivum Traes_7DL_3547B7B9A N
TRIUR3_12775 Triticum urartu TRIUR3_12775 N
TRIUR3_25489 Triticum urartu TRIUR3_25489 N
TRIUR3_30366 Triticum urartu TRIUR3_30366 N
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N
VIT_16s0039g01560 Vitis vinifera VIT_16s0039g01560 N
VIT_18s0122g00320 Vitis vinifera VIT_18s0122g00320 N
GRMZM2G004548 Zea mays GRMZM2G004548 N
GRMZM2G086403 Zea mays GRMZM2G086403 N
GRMZM2G091044 Zea mays GRMZM2G091044 N
GRMZM2G131280 Zea mays GRMZM2G131280 N
GRMZM2G408887 Zea mays GRMZM2G408887 N