Pavir.Da00498 (Panicum virgatum)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Pavir.Da00498 T316141_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da00498.1.p PLATZ 76 147
Pavir.Da00498.2.p PLATZ 76 147

Links

Other PLATZ family TFs
Other Panicum virgatum TFs

266 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA023292 Oryza indica BGIOSGA023292 N 1.000
LPERR06G17910 Leersia perrieri LPERR06G17910 N 1.000
OB06G29400 Oryza brachyantha OB06G29400 N 1.000
OBART06G21430 Oryza barthii OBART06G21430 N 1.000
OGLUM06G22610 Oryza glumaepatula OGLUM06G22610 N 1.000
OLONG_015674 Oryza longistaminata OLONG_015674 N 1.000
OMERI01G31170 Oryza meridionalis OMERI01G31170 N 1.000
ONIVA06G25330 Oryza nivara ONIVA06G25330 N 1.000
OPUNC06G19460 Oryza punctata OPUNC06G19460 N 1.000
ORGLA06G0177200 Oryza glaberrima ORGLA06G0177200 N 1.000
ORUFI06G22980 Oryza rufipogon ORUFI06G22980 N 1.000
OS06G0624900 Oryza sativa OS06G0624900 N 1.000
Sb10g024575 Sorghum bicolor Sb10g024575 N 1.000
Si007136m.g Setaria italica Si007136m.g N 1.000
Pavir.Db00732 Panicum virgatum Pavir.Db00732 N 1.000
BRADI1G35697 Brachypodium distachyon BRADI1G35697 N 0.986
MLOC_59330 Hordeum vulgare MLOC_59330 N 0.986
Traes_7DL_3547B7B9A Triticum aestivum Traes_7DL_3547B7B9A N 0.986
F775_08136 Aegilops tauschii F775_08136 N 0.972
TRIUR3_12775 Triticum urartu TRIUR3_12775 N 0.972
GSMUA_Achr9G12280_001 Musa acuminata GSMUA_Achr9G12280_001 N 0.931
GSMUA_Achr7G20650_001 Musa acuminata GSMUA_Achr7G20650_001 N 0.875
GSMUA_AchrUn_randomG24560_001 Musa acuminata GSMUA_AchrUn_randomG24560_001 N 0.875
TCM_034802 Theobroma cacao TCM_034802 N 0.875
VIT_18s0122g00320 Vitis vinifera VIT_18s0122g00320 N 0.875
cassava13654.valid.m1 Manihot esculenta cassava13654.valid.m1 N 0.875
Aquca_095_00049 Aquilegia coerulea Aquca_095_00049 N 0.875
POPTR_0002s00430 Populus trichocarpa POPTR_0002s00430 N 0.861
XM_002306973.1 Populus trichocarpa POPTR_0005s28040 N 0.861
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.861
Pm022874 Prunus mume Pm022874 N 0.861
30170.m013811 Ricinus communis 30170.m013811 N 0.861
cassava7406.valid.m1 Manihot esculenta cassava7406.valid.m1 N 0.861
Ciclev10002292m.g Citrus clementina Ciclev10002292m.g N 0.861
Lus10040292.g Linum usitatissimum Lus10040292.g N 0.861
orange1.1g025742m.g Citrus sinensis orange1.1g025742m.g N 0.861
SapurV1A.0016s0060 Salix purpurea SapurV1A.0016s0060 N 0.861
SapurV1A.0554s0100 Salix purpurea SapurV1A.0554s0100 N 0.861
Bo5g030950 Brassica oleracea Bo5g030950 N 0.847
Bra025865 Brassica rapa Bra025865 N 0.847
scaffold_102351.1 Arabidopsis lyrata scaffold_102351.1 N 0.847
Bostr.7128s0691 Boechera stricta Bostr.7128s0691 N 0.847
Cagra.7414s0001 Capsella grandiflora Cagra.7414s0001 N 0.847
Carubv10009696m.g Capsella rubella Carubv10009696m.g N 0.847
Lus10000952.g Linum usitatissimum Lus10000952.g N 0.847
Lus10002700.g Linum usitatissimum Lus10002700.g N 0.847
MDP0000133007 Malus domestica MDP0000133007 N 0.847
MDP0000133008 Malus domestica MDP0000133008 N 0.847
MDP0000225862 Malus domestica MDP0000225862 N 0.847
Thhalv10008598m.g Eutrema salsugineum Thhalv10008598m.g N 0.847
PK14253.1 Cannabis sativa PK14253.1 N 0.847
AT1G21000 Arabidopsis thaliana AT1G21000 N 0.833
AT1G76590 Arabidopsis thaliana AT1G76590 N 0.833
Bo6g120700 Brassica oleracea Bo6g120700 N 0.833
Bo7g059750 Brassica oleracea Bo7g059750 N 0.833
Bra012263 Brassica rapa Bra012263 N 0.833
Bra015731 Brassica rapa Bra015731 N 0.833
Bra016441 Brassica rapa Bra016441 N 0.833
fgenesh2_kg.2__1947__AT1G76590.1 Arabidopsis lyrata fgenesh2_kg.2__1947__AT1G76590.1 N 0.833
GSMUA_Achr6G36360_001 Musa acuminata GSMUA_Achr6G36360_001 N 0.833
Bostr.20129s0097 Boechera stricta Bostr.20129s0097 N 0.833
Cagra.2281s0027 Capsella grandiflora Cagra.2281s0027 N 0.833
Carubv10020852m.g Capsella rubella Carubv10020852m.g N 0.833
Eucgr.F01950 Eucalyptus grandis Eucgr.F01950 N 0.833
gene29145-v1.0-hybrid Fragaria vesca gene29145-v1.0-hybrid N 0.833
Thhalv10019067m.g Eutrema salsugineum Thhalv10019067m.g N 0.833
AMTR_s00022p00039680 Amborella trichopoda AMTR_s00022p00039680 N 0.819
TCM_015701 Theobroma cacao TCM_015701 N 0.819
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N 0.819
Bo8g070540 Brassica oleracea Bo8g070540 N 0.806
PGSC0003DMG400009931 Solanum tuberosum PGSC0003DMG400009931 N 0.806
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.806
30054.m000824 Ricinus communis 30054.m000824 N 0.806
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.806
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.806
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.806
Eucgr.F03621 Eucalyptus grandis Eucgr.F03621 N 0.806
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N 0.806
Lus10023411.g Linum usitatissimum Lus10023411.g N 0.806
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.806
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.792
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.792
Bo6g084850 Brassica oleracea Bo6g084850 N 0.792
Bra003715 Brassica rapa Bra003715 N 0.792
Bra023280 Brassica rapa Bra023280 N 0.792
MTR_4g078170 Medicago truncatula MTR_4g078170 N 0.792
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.792
Cla008966 Citrullus lanatus Cla008966 N 0.792
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.792
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.792
mgf002787m Mimulus guttatus mgf002787m N 0.792
mgf004069m Mimulus guttatus mgf004069m N 0.792
mgf010773m Mimulus guttatus mgf010773m N 0.792
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.792
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.792
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.792
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.792
Gorai.004G184500 Gossypium raimondii Gorai.004G184500 N 0.792
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.792
Lus10020337.g Linum usitatissimum Lus10020337.g N 0.792
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N 0.792
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N 0.792
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N 0.792
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N 0.792
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N 0.792
PK20928.1 Cannabis sativa PK20928.1 N 0.792
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.778
Bo5g049240 Brassica oleracea Bo5g049240 N 0.778
Bo8g028900 Brassica oleracea Bo8g028900 N 0.778
Bra035494 Brassica rapa Bra035494 N 0.778
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N 0.778
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.778
GLYMA01G44430 Glycine max GLYMA01G44430 N 0.778
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.778
GLYMA11G11640 Glycine max GLYMA11G11640 N 0.778
GLYMA12G01890 Glycine max GLYMA12G01890 N 0.778
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.778
GRMZM2G131280 Zea mays GRMZM2G131280 N 0.778
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.778
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N 0.778
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.778
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.778
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.778
OB02G35810 Oryza brachyantha OB02G35810 N 0.778
OBART02G28660 Oryza barthii OBART02G28660 N 0.778
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.778
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.778
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.778
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.778
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.778
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.778
OS02G0692700 Oryza sativa OS02G0692700 N 0.778
PGSC0003DMG400007670 Solanum tuberosum PGSC0003DMG400007670 N 0.778
PGSC0003DMG400017518 Solanum tuberosum PGSC0003DMG400017518 N 0.778
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N 0.778
Solyc06g061240.2 Solanum lycopersicum Solyc06g061240.2 N 0.778
Solyc08g076860.2 Solanum lycopersicum Solyc08g076860.2 N 0.778
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.778
Ca_11235 Cicer arietinum Ca_11235 N 0.778
Ca_11505 Cicer arietinum Ca_11505 N 0.778
Ca_11837 Cicer arietinum Ca_11837 N 0.778
Ca_12361 Cicer arietinum Ca_12361 N 0.778
Cla016461 Citrullus lanatus Cla016461 N 0.778
Pm023220 Prunus mume Pm023220 N 0.778
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.778
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.778
mgf006925m Mimulus guttatus mgf006925m N 0.778
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.778
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.778
evm.TU.supercontig_71.62 Carica papaya evm.TU.supercontig_71.62 N 0.778
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N 0.778
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.778
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.778
MDP0000553473 Malus domestica MDP0000553473 N 0.778
MDP0000570901 Malus domestica MDP0000570901 N 0.778
chr1.CM0591.460.nd Lotus japonicus chr1.CM0591.460.nd N 0.778
chr3.CM0127.220.nc Lotus japonicus chr3.CM0127.220.nc N 0.778
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.778
AMTR_s00002p00211460 Amborella trichopoda AMTR_s00002p00211460 N 0.764
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.764
Bo7g105550 Brassica oleracea Bo7g105550 N 0.764
Bra021029 Brassica rapa Bra021029 N 0.764
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.764
GLYMA11G01100 Glycine max GLYMA11G01100 N 0.764
GRMZM2G004548 Zea mays GRMZM2G004548 N 0.764
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.764
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N 0.764
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.764
LPERR04G19240 Leersia perrieri LPERR04G19240 N 0.764
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.764
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.764
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.764
OB04G30420 Oryza brachyantha OB04G30420 N 0.764
OBART04G23520 Oryza barthii OBART04G23520 N 0.764
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.764
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.764
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.764
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.764
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.764
OS04G0591100 Oryza sativa OS04G0591100 N 0.764
PGSC0003DMG400017849 Solanum tuberosum PGSC0003DMG400017849 N 0.764
POPTR_0013s07610 Populus trichocarpa POPTR_0013s07610 N 0.764
POPTR_0019s07790 Populus trichocarpa POPTR_0019s07790 N 0.764
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.764
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.764
Si010911m.g Setaria italica Si010911m.g N 0.764
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N 0.764
VIT_16s0039g01560 Vitis vinifera VIT_16s0039g01560 N 0.764
30073.m002298 Ricinus communis 30073.m002298 N 0.764
cassava13685.valid.m1 Manihot esculenta cassava13685.valid.m1 N 0.764
cassava22380.valid.m1 Manihot esculenta cassava22380.valid.m1 N 0.764
e_gw1.6.367.1 Physcomitrella patens e_gw1.6.367.1 N 0.764
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N 0.764
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.764
Cagra.3356s0083 Capsella grandiflora Cagra.3356s0083 N 0.764
Carubv10005524m.g Capsella rubella Carubv10005524m.g N 0.764
Ciclev10032089m.g Citrus clementina Ciclev10032089m.g N 0.764
evm.TU.supercontig_43.104 Carica papaya evm.TU.supercontig_43.104 N 0.764
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.764
Gorai.013G184000 Gossypium raimondii Gorai.013G184000 N 0.764
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.764
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N 0.764
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.764
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.764
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.764
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.764
AMTR_s00008p00208550 Amborella trichopoda AMTR_s00008p00208550 N 0.750
Bra012632 Brassica rapa Bra012632 N 0.750
Bra013266 Brassica rapa Bra013266 N 0.750
F775_28196 Aegilops tauschii F775_28196 N 0.750
fgenesh2_kg.7__2515__AT4G17900.1 Arabidopsis lyrata fgenesh2_kg.7__2515__AT4G17900.1 N 0.750
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.750
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.750
MTR_5g007230 Medicago truncatula MTR_5g007230 N 0.750
Si017318m.g Setaria italica Si017318m.g N 0.750
Solyc08g005100.2 Solanum lycopersicum Solyc08g005100.2 N 0.750
TCM_025548 Theobroma cacao TCM_025548 N 0.750
Traes_2AL_74EFA5757 Triticum aestivum Traes_2AL_74EFA5757 N 0.750
Traes_2BL_69847FCA6 Triticum aestivum Traes_2BL_69847FCA6 N 0.750
TRIUR3_25489 Triticum urartu TRIUR3_25489 N 0.750
TRIUR3_30366 Triticum urartu TRIUR3_30366 N 0.750
Bostr.30275s0258 Boechera stricta Bostr.30275s0258 N 0.750
Gorai.003G056500 Gossypium raimondii Gorai.003G056500 N 0.750
SapurV1A.0182s0280 Salix purpurea SapurV1A.0182s0280 N 0.750
SapurV1A.1141s0070 Salix purpurea SapurV1A.1141s0070 N 0.750
Thhalv10026159m.g Eutrema salsugineum Thhalv10026159m.g N 0.750
PK01309.1 Cannabis sativa PK01309.1 N 0.750
AT4G17900 Arabidopsis thaliana AT4G17900 N 0.740
Bo8g049810 Brassica oleracea Bo8g049810 N 0.740
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.736
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N 0.736
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.736
Traes_7BL_694F67827 Triticum aestivum Traes_7BL_694F67827 N 0.736
cassava15058.m1 Manihot esculenta cassava15058.m1 N 0.736
Bo1g018010 Brassica oleracea Bo1g018010 N 0.726
SapurV1A.1628s0020 Salix purpurea SapurV1A.1628s0020 N 0.726
Al_scaffold_0001_3792 Arabidopsis lyrata Al_scaffold_0001_3792 N 0.722
AT1G43000 Arabidopsis thaliana AT1G43000 N 0.722
Bo7g075640 Brassica oleracea Bo7g075640 N 0.722
Bra025003 Brassica rapa Bra025003 N 0.722
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.722
PRUPE_ppa011630mg Prunus persica PRUPE_ppa011630mg N 0.722
Ca_00735 Cicer arietinum Ca_00735 N 0.722
Pm026291 Prunus mume Pm026291 N 0.722
Ciclev10012756m.g Citrus clementina Ciclev10012756m.g N 0.722
Ciclev10030107m.g Citrus clementina Ciclev10030107m.g N 0.722
orange1.1g028382m.g Citrus sinensis orange1.1g028382m.g N 0.722
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.722
Thhalv10001013m.g Eutrema salsugineum Thhalv10001013m.g N 0.722
PK29286.1 Cannabis sativa PK29286.1 N 0.722
GLYMA03G34530 Glycine max GLYMA03G34530 N 0.708
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.708
OB10G26540 Oryza brachyantha OB10G26540 N 0.708
POPTR_0006s12100 Populus trichocarpa POPTR_0006s12100 N 0.708
SELMODRAFT_410393 Selaginella moellendorffii SELMODRAFT_410393 N 0.708
SELMODRAFT_411504 Selaginella moellendorffii SELMODRAFT_411504 N 0.708
Cla010408 Citrullus lanatus Cla010408 N 0.708
30078.m002228 Ricinus communis 30078.m002228 N 0.708
Cucsa.318510 Cucumis sativus Cucsa.318510 N 0.708
Aquca_019_00150 Aquilegia coerulea Aquca_019_00150 N 0.708
Bostr.12302s0015 Boechera stricta Bostr.12302s0015 N 0.708
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N 0.708
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.708
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.708
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.708