CapteG76255 (Capitella teleta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CapteG76255 T082825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.773 0.833
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.767 0.825
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.767 0.825
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.767 0.825
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.767 0.825
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.767 0.825
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.767 0.825
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.767 0.825
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.767 0.825
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.767 0.825
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.767 0.825
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.767 0.825
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.767 0.825
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.764 0.816
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.759 0.807
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.759 0.807
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.759 0.807
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.759 0.807
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CapteP76255 C2H2 ZF 2 24
CapteP76255 C2H2 ZF 33 55
CapteP76255 C2H2 ZF 59 81
CapteP76255 C2H2 ZF 87 109
CapteP76255 C2H2 ZF 115 136

Links

Other C2H2 ZF family TFs
Other Capitella teleta TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00025p00072580 Amborella trichopoda AMTR_s00025p00072580 I 0.000
Aquca_043_00021 Aquilegia coerulea Aquca_043_00021 I 0.000
scaffold_401930.1 Arabidopsis lyrata scaffold_401930.1 I 0.000
ASR3 Arabidopsis thaliana AT2G33550 D 0.000
Bostr.23794s0746 Boechera stricta Bostr.23794s0746 I 0.000
Bo4g043600 Brassica oleracea Bo4g043600 I 0.000
Bo4g182020 Brassica oleracea Bo4g182020 I 0.000
Bra021860 Brassica rapa Bra021860 I 0.000
Bra005486 Brassica rapa Bra005486 I 0.000
PK25885.1 Cannabis sativa PK25885.1 I 0.000
Carubv10023675m.g Capsella rubella Carubv10023675m.g I 0.000
evm.TU.supercontig_2461.1 Carica papaya evm.TU.supercontig_2461.1 I 0.000
Cla001502 Citrullus lanatus Cla001502 I 0.000
Ciclev10033491m.g Citrus clementina Ciclev10033491m.g I 0.000
Ciclev10005329m.g Citrus clementina Ciclev10005329m.g I 0.000
orange1.1g038571m.g Citrus sinensis orange1.1g038571m.g I 0.000
orange1.1g019057m.g Citrus sinensis orange1.1g019057m.g I 0.000
Cucsa.349220 Cucumis sativus Cucsa.349220 I 0.000
Eucgr.B03553 Eucalyptus grandis Eucgr.B03553 I 0.000
Thhalv10016974m.g Eutrema salsugineum Thhalv10016974m.g I 0.000
GLYMA18G51790 Glycine max GLYMA18G51790 I 0.000
GLYMA08G28880 Glycine max GLYMA08G28880 I 0.000
Gorai.002G021600 Gossypium raimondii Gorai.002G021600 I 0.000
chr1.LjT14I13.140.nd Lotus japonicus chr1.LjT14I13.140.nd I 0.000
MDP0000232058 Malus domestica MDP0000232058 I 0.000
cassava40545.m1 Manihot esculenta cassava40545.m1 I 0.000
cassava13649.valid.m1 Manihot esculenta cassava13649.valid.m1 I 0.000
cassava12909.valid.m1 Manihot esculenta cassava12909.valid.m1 I 0.000
mgf009760m Mimulus guttatus mgf009760m I 0.000
POPTR_0003s16150 Populus trichocarpa POPTR_0003s16150 I 0.000
POPTR_0001s13060 Populus trichocarpa POPTR_0001s13060 I 0.000
Pm024597 Prunus mume Pm024597 I 0.000
30128.m008552 Ricinus communis 30128.m008552 I 0.000
SapurV1A.2674s0010 Salix purpurea SapurV1A.2674s0010 I 0.000
Si017674m.g Setaria italica Si017674m.g I 0.000
Solyc04g045430.2 Solanum lycopersicum Solyc04g045430.2 I 0.000
VIT_17s0000g00270 Vitis vinifera VIT_17s0000g00270 I 0.000
VIT_01s0150g00050 Vitis vinifera VIT_01s0150g00050 I 0.000