CBN22561 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN22561 T083063_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ces-1
M00608_2.00 		Caenorhabditis elegans
CCTGTTG
CAACAGG		 PBM
Narasimhan et al.(2015)
pTH9158 		0.818 0.947
ces-1
M09518_2.00 		Caenorhabditis elegans
NWAATYNRATTW
WAATYNRATTWN		 Misc
Heinz et al.(2010)
cElegans-L1-CES1_modEncode 		0.818 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN22561 C2H2 ZF 121 143
CBN22561 C2H2 ZF 152 174
CBN22561 C2H2 ZF 178 200
CBN22561 C2H2 ZF 206 228
CBN22561 C2H2 ZF 234 255

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MCYG_04841 Arthroderma otae MCYG_04841 N
MCYG_02842 Arthroderma otae MCYG_02842 N
M437DRAFT_58413 Aureobasidium melanogenum M437DRAFT_58413 N
M438DRAFT_351454 Aureobasidium pullulans M438DRAFT_351454 N
AUEXF2481DRAFT_35837 Aureobasidium subglaciale AUEXF2481DRAFT_35837 N
BAUCODRAFT_118821 Baudoinia compniacensis BAUCODRAFT_118821 N
BGHDH14_bgh02111 Blumeria graminis BGHDH14_bgh02111 N
Bcin13g04470 Botrytis cinerea Bcin13g04470 N
CGGC5_11142 Colletotrichum gloeosporioides CGGC5_11142 N
W97_02042 Coniosporium apollinis W97_02042 N
DOTSEDRAFT_70172 Dothistroma septosporum DOTSEDRAFT_70172 N
EV44_g3378 Erysiphe necator EV44_g3378 N
GGTG_11436 Gaeumannomyces graminis GGTG_11436 N
MGG_01127 Magnaporthe oryzae MGG_01127 N
MAPG_02433 Magnaporthe poae MAPG_02433 N
MCYG_04841 Microsporum canis MCYG_04841 N
MCYG_02842 Microsporum canis MCYG_02842 N
MGYG_08075 Microsporum gypseum MGYG_08075 N
estExt_fgenesh1_kg.C_chr_10255 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_10255 N
PFICI_07310 Pestalotiopsis fici PFICI_07310 N
MYCFIDRAFT_211282 Pseudocercospora fijiensis MYCFIDRAFT_211282 N
GMDG_01897 Pseudogymnoascus destructans GMDG_01897 N
V499_08459 Pseudogymnoascus pannorum V499_08459 N
SS1G_13549 Sclerotinia sclerotiorum SS1G_13549 N
SEPMUDRAFT_62999 Sphaerulina musiva SEPMUDRAFT_62999 N
TPHA_0H00790 Tetrapisispora phaffii TPHA_0H00790 I
H101_07630 Trichophyton interdigitale H101_07630 N
H102_05371 Trichophyton rubrum H102_05371 N
H105_05414 Trichophyton soudanense H105_05414 N
TRV_03604 Trichophyton verrucosum TRV_03604 N
PV09_03847 Verruconis gallopava PV09_03847 N
Mycgr3G102207 Zymoseptoria tritici Mycgr3G102207 N