CGI_10005451 (Crassostrea gigas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CGI_10005451 T083424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.773 0.841
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.773 0.841
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.773 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC27677 C2H2 ZF 263 285
EKC27677 C2H2 ZF 295 316
EKC27677 C2H2 ZF 320 342
EKC27677 C2H2 ZF 348 370
EKC27677 C2H2 ZF 376 397

Links

Other C2H2 ZF family TFs
Other Crassostrea gigas TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001198 Acyrthosiphon pisum ACYPI001198 I 0.762
AAEL003978 Aedes aegypti AAEL003978 I 0.764
AALB005349 Anopheles albimanus AALB005349 I 0.764
AATE004981 Anopheles atroparvus AATE004981 I 0.781
ACOM027947 Anopheles coluzzii ACOM027947 I 0.756
ACUA018690 Anopheles culicifacies ACUA018690 I 0.756
ADAC007927 Anopheles darlingi ADAC007927 I 0.764
AFUN000435 Anopheles funestus AFUN000435 I 0.756
AGAP005390 Anopheles gambiae AGAP005390 I 0.756
AMAM014424 Anopheles maculatus AMAM014424 I 0.756
AMEC006310 Anopheles melas AMEC006310 I 0.756
AMEM010751 Anopheles merus AMEM010751 I 0.756
AMIN007420 Anopheles minimus AMIN007420 I 0.756
AQUA007695 Anopheles quadriannulatus AQUA007695 I 0.756
GB42492 Apis mellifera GB42492 I 0.776
ACEP27778 Atta cephalotes ACEP27778 I 0.778
BGLB003738 Biomphalaria glabrata BGLB003738 I 0.797
e_gw.6.95.1 Branchiostoma floridae e_gw.6.95.1 I 0.792
CapteG19364 Capitella teleta CapteG19364 I 0.790
CpipJ_CPIJ005455 Culex pipiens CpipJ_CPIJ005455 I 0.764
CPIJ005455 Culex quinquefasciatus CPIJ005455 I 0.764
DAPPUDRAFT_53927 Daphnia pulex DAPPUDRAFT_53927 I 0.756
YQE_07798 Dendroctonus ponderosae YQE_07798 I 0.780
GF25038 Drosophila ananassae FBgn0102030 I 0.776
GG14656 Drosophila erecta FBgn0106912 I 0.776
GH15211 Drosophila grimshawi FBgn0122686 I 0.773
Kah Drosophila melanogaster FBgn0035144 D 0.773
GI16731 Drosophila mojavensis FBgn0139479 I 0.776
GA14370 Drosophila pseudoobscura FBgn0074398 I 0.773
GM14272 Drosophila sechellia FBgn0169198 I 0.773
GJ12475 Drosophila virilis FBgn0199717 I 0.776
GK17557 Drosophila willistoni FBgn0219556 I 0.773
GE21016 Drosophila yakuba FBgn0238298 I 0.773
HelroG68814 Helobdella robusta HelroG68814 N 0.762
LDEC013204 Leptinotarsa decemlineata LDEC013204 I 0.780
LCUP006416 Lucilia cuprina LCUP006416 I 0.776
LLOJ001905 Lutzomyia longipalpis LLOJ001905 I 0.780
MDOA000347 Musca domestica MDOA000347 I 0.776
NV16451 Nasonia vitripennis NV16451 I 0.764
Ocbimv22026834m.g Octopus bimaculoides Ocbimv22026834m.g I 0.794
PHUM530390 Pediculus humanus PHUM530390 I 0.780
SINV14822 Solenopsis invicta SINV14822 I 0.778
SPU_015640 Strongylocentrotus purpuratus SPU_015640 I 0.785
tetur14g01820 Tetranychus urticae tetur14g01820 I 0.774
TC002803 Tribolium castaneum TC002803 I 0.768
L798_08219 Zootermopsis nevadensis L798_08219 I 0.780