CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CJA16978
(
Caenorhabditis japonica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CJA16978
T083784_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ref-2
M00621_2.00
Caenorhabditis elegans
CMYRSNGNBH
DVNCNSYRKG
PBM
Narasimhan et al.(2015)
pTH9089
0.763
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA16978
C2H2 ZF
103
130
FICLWRGCDREYKQFKAKYKLVNHMRVH
CJA16978
C2H2 ZF
136
158
FTCEQCNKVFARSENLKIHKRIH
CJA16978
C2H2 ZF
164
188
FRCTHDGCTKLFANSSDRKKHMHVH
CJA16978
C2H2 ZF
194
218
YCCTNPNCGKQYTHPSSLRKHMKAH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis japonica
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_072580
Acremonium chrysogenum
ACRE_072580
N
BDDG_05627
Blastomyces dermatitidis
BDDG_05627
N
CHGG_06838
Chaetomium globosum
CHGG_06838
N
CTHT_0041960
Chaetomium thermophilum
CTHT_0041960
N
Z519_11212
Cladophialophora bantiana
Z519_11212
N
PV07_01727
Cladophialophora immunda
PV07_01727
N
A1O5_13077
Cladophialophora psammophila
A1O5_13077
N
CPUR_05959
Claviceps purpurea
CPUR_05959
N
CFIO01_13541
Colletotrichum fioriniae
CFIO01_13541
N
CGGC5_13894
Colletotrichum gloeosporioides
CGGC5_13894
N
GLRG_06613
Colletotrichum graminicola
GLRG_06613
N
CH063_09725
Colletotrichum higginsianum
CH063_09725
N
Cob_09235
Colletotrichum orbiculare
Cob_09235
N
fgenesh1_pg.C_scaffold_6000694
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_6000694
N
PV08_03448
Exophiala spinifera
PV08_03448
N
Z517_04305
Fonsecaea pedrosoi
Z517_04305
N
FFUJ_09966
Fusarium fujikuroi
FFUJ_09966
N
FGRRES_04480
Fusarium graminearum
FGRRES_04480
N
FOXG_13734
Fusarium oxysporum
FOXG_13734
N
FPSE_08283
Fusarium pseudograminearum
FPSE_08283
N
NechaG47910
Fusarium solani
NechaG47910
N
FVEG_11163
Fusarium verticillioides
FVEG_11163
N
GGTG_13196
Gaeumannomyces graminis
GGTG_13196
N
MAPG_08866
Magnaporthe poae
MAPG_08866
N
MANI_008894
Metarhizium anisopliae
MANI_008894
N
MBR_10425
Metarhizium brunneum
MBR_10425
N
X797_008798
Metarhizium robertsii
X797_008798
N
MYCTH_47428
Myceliophthora thermophila
MYCTH_47428
N
e_gw1.11.552.1
Nectria haematococca
e_gw1.11.552.1
N
estExt_Genewise1Plus.C_12818
Neurospora discreta
estExt_Genewise1Plus.C_12818
N
F503_03992
Ophiostoma piceae uamh
F503_03992
N
PABG_01155
Paracoccidioides brasiliensis
PABG_01155
N
PAAG_06883
Paracoccidioides sp lutzii
PAAG_06883
N
PFICI_06181
Pestalotiopsis fici
PFICI_06181
N
PODANS_2_13840
Podospora anserina
PODANS_2_13840
N
GMDG_06617
Pseudogymnoascus destructans
GMDG_06617
N
V499_03096
Pseudogymnoascus pannorum
V499_03096
N
SPBR_01455
Sporothrix brasiliensis
SPBR_01455
N
HMPREF1624_03754
Sporothrix schenckii
HMPREF1624_03754
N
S40288_01316
Stachybotrys chartarum
S40288_01316
N
S40285_03547
Stachybotrys chlorohalonata
S40285_03547
N
THITE_39797
Thielavia terrestris
THITE_39797
N