CMQ_5444 (Grosmannia clavigera)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CMQ_5444 T083869_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.815 0.957
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.798 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX03394 C2H2 ZF 100 122
EFX03394 C2H2 ZF 128 152
EFX03394 C2H2 ZF 158 180
EFX03394 C2H2 ZF 186 210

Links

Other C2H2 ZF family TFs
Other Grosmannia clavigera TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR01G32380 Leersia perrieri LPERR01G32380 N 0.000
OBART07G08680 Oryza barthii OBART07G08680 N 0.000
OBART07G07450 Oryza barthii OBART07G07450 N 0.000
OBART01G37720 Oryza barthii OBART01G37720 N 0.000
OBART07G07440 Oryza barthii OBART07G07440 N 0.000
OB01G46450 Oryza brachyantha OB01G46450 N 0.000
ORGLA01G0315200 Oryza glaberrima ORGLA01G0315200 N 0.000
ORGLA07G0062800 Oryza glaberrima ORGLA07G0062800 N 0.000
ORGLA07G0073600 Oryza glaberrima ORGLA07G0073600 N 0.000
OGLUM07G07150 Oryza glumaepatula OGLUM07G07150 N 0.000
BGIOSGA025449 Oryza indica BGIOSGA025449 N 0.000
BGIOSGA004824 Oryza indica BGIOSGA004824 N 0.000
BGIOSGA024590 Oryza indica BGIOSGA024590 N 0.000
OLONG_012136 Oryza longistaminata OLONG_012136 N 0.000
OLONG_021151 Oryza longistaminata OLONG_021151 N 0.000
OLONG_023640 Oryza longistaminata OLONG_023640 N 0.000
OMERI07G07070 Oryza meridionalis OMERI07G07070 N 0.000
ONIVA01G42540 Oryza nivara ONIVA01G42540 N 0.000
ONIVA07G07540 Oryza nivara ONIVA07G07540 N 0.000
ONIVA07G05990 Oryza nivara ONIVA07G05990 N 0.000
ONIVA07G05980 Oryza nivara ONIVA07G05980 N 0.000
OPUNC01G36560 Oryza punctata OPUNC01G36560 N 0.000
OPUNC07G07180 Oryza punctata OPUNC07G07180 N 0.000
OPUNC07G08180 Oryza punctata OPUNC07G08180 N 0.000
ORUFI01G41050 Oryza rufipogon ORUFI01G41050 N 0.000
ORUFI07G07450 Oryza rufipogon ORUFI07G07450 N 0.000
ORUFI07G07460 Oryza rufipogon ORUFI07G07460 N 0.000
ORUFI07G08780 Oryza rufipogon ORUFI07G08780 N 0.000
OS01G0855400 Oryza sativa OS01G0855400 N 0.000
Sb01g013830 Sorghum bicolor Sb01g013830 N 0.000
GRMZM2G121570 Zea mays GRMZM2G121570 N 0.000