CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CORT_0C07280
(
Candida orthopsilosis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CORT_0C07280
T084249_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN
NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.792
0.870
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN
NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.792
0.804
MIG1
M00026_2.00
Saccharomyces cerevisiae
HCCCCRCN
NGYGGGGD
PBM
Badis et al.(2008)
MIG1_2106
0.758
0.739
MIG1
M01532_2.00
Saccharomyces cerevisiae
NCYCCRBNNN
NNNVYGGRGN
PBM
Zhu et al.(2009)
Mig1
0.758
0.739
MIG1
M07456_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1
0.758
0.739
MIG1
M08523_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
Misc
DeBoer et al.(2011)
YGL035C_555
0.758
0.739
MIG1
M08524_2.00
Saccharomyces cerevisiae
CCCCRSWWWW
WWWWSYGGGG
Misc
DeBoer et al.(2011)
YGL035C_654
0.758
0.739
MIG1
M10391_2.00
Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM
KHHWWWWAHSYGGGGDN
Transfac
Matys et al.(2006)
F$MIG1_01
0.758
0.739
MIG1
M10392_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_03
0.758
0.739
MIG1
M10393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_Q6
0.758
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCG26098
C2H2 ZF
77
99
YKCPHCEKAFHRLEHQTRHIRTH
CCG26098
C2H2 ZF
105
129
HVCKFPGCTKKFSRSDELTRHLRIH
Links
Other
C2H2 ZF
family TFs
Other
Candida orthopsilosis
TFs
278 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g09085
Acanthocheilonema viteae
nAv.1.0.1.g09085
N
ASIM_0001676401
Anisakis simplex
ASIM_0001676401
N
ALUE_0000590301
Ascaris lumbricoides
ALUE_0000590301
N
ASU_04966
Ascaris suum
ASU_04966
N
Bm4541
Brugia malayi
Bm4541
N
CBN24253
Caenorhabditis brenneri
CBN24253
N
CBG10038
Caenorhabditis briggsae
CBG10038
N
gei-13
Caenorhabditis elegans
WBGene00001570
N
CJA06713
Caenorhabditis japonica
CJA06713
N
CRE25566
Caenorhabditis remanei
CRE25566
N
nDi.2.2.2.g00142
Dirofilaria immitis
nDi.2.2.2.g00142
N
DME_0000389301
Dracunculus medinensis
DME_0000389301
N
EEL_0000246901
Elaeophora elaphi
EEL_0000246901
N
HCOI00039700
Haemonchus contortus
HCOI00039700
N
Hba_11216
Heterorhabditis bacteriophora
Hba_11216
N
nLs.2.1.2.g08165
Litomosoides sigmodontis
nLs.2.1.2.g08165
N
LOAG_17673
Loa loa
LOAG_17673
N
nOo.2.0.1.g06019
Onchocerca ochengi
nOo.2.0.1.g06019
N
WBGene00245587
Onchocerca volvulus
WBGene00245587
N
Ppa-gei-13
Pristionchus pacificus
PPA19882
N
L889_g22347
Steinernema feltiae
L889_g22347
N
L893_g18581
Steinernema glaseri
L893_g18581
N
L898_g16670
Steinernema monticolum
L898_g16670
N
L892_g20284
Steinernema scapterisci
L892_g20284
N
SMUV_0000711101
Syphacia muris
SMUV_0000711101
N
TCLT_0000679601
Thelazia callipaeda
TCLT_0000679601
N