CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA06713
(
Caenorhabditis japonica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
CJA06713
T025782_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA06713
BED ZF
195
234
NPVWPYFDVIDGTARCKQCLYSTKSVFSTNLKVHLRSHHR
CJA06713
BED ZF
445
485
HPVWVYFKDLEDRMVGCTNCEFRTGSAFSTNLKMHLKAHHK
Links
Other
BED ZF
family TFs
Other
Caenorhabditis japonica
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gei-13
Caenorhabditis elegans
WBGene00001570
N
1.000
CBG10038
Caenorhabditis briggsae
CBG10038
N
0.988
CBN24253
Caenorhabditis brenneri
CBN24253
N
0.988
CRE25566
Caenorhabditis remanei
CRE25566
N
0.988
Hba_11216
Heterorhabditis bacteriophora
Hba_11216
N
0.951
HCOI00039700
Haemonchus contortus
HCOI00039700
N
0.938
Ppa-gei-13
Pristionchus pacificus
PPA19882
N
0.889
L596_g10637
Steinernema carpocapsae
L596_g10637
N
0.802
L889_g22347
Steinernema feltiae
L889_g22347
N
0.790
L892_g20284
Steinernema scapterisci
L892_g20284
N
0.790
L893_g18581
Steinernema glaseri
L893_g18581
N
0.790
L898_g16670
Steinernema monticolum
L898_g16670
N
0.790
EVEC_0000342301
Enterobius vermicularis
EVEC_0000342301
N
0.753
Bm4541
Brugia malayi
Bm4541
N
0.741
LOAG_17673
Loa loa
LOAG_17673
N
0.741
WBGene00245587
Onchocerca volvulus
WBGene00245587
N
0.741
ALUE_0000590301
Ascaris lumbricoides
ALUE_0000590301
N
0.741
ASIM_0001676401
Anisakis simplex
ASIM_0001676401
N
0.741
ASU_04966
Ascaris suum
ASU_04966
N
0.741
nDi.2.2.2.g00142
Dirofilaria immitis
nDi.2.2.2.g00142
N
0.741
nLs.2.1.2.g08165
Litomosoides sigmodontis
nLs.2.1.2.g08165
N
0.741
SMUV_0000711101
Syphacia muris
SMUV_0000711101
N
0.741
nAv.1.0.1.g09085
Acanthocheilonema viteae
nAv.1.0.1.g09085
N
0.723
TCLT_0000679601
Thelazia callipaeda
TCLT_0000679601
N
0.716
EEL_0000246901
Elaeophora elaphi
EEL_0000246901
N
0.711