CRE00192 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE00192 T084954_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK

MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.820 0.957
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN

NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.766 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE00192 C2H2 ZF 125 147
CRE00192 C2H2 ZF 153 175
CRE00192 C2H2 ZF 181 203

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALNC14_038710 Albugo laibachii ALNC14_038710 N 0.000
ALNC14_045170 Albugo laibachii ALNC14_045170 N 0.000
HpaG811065 Hyaloperonospora arabidopsidis HpaG811065 N 0.000
estExt_Genewise1.C_70435 Phytophthora capsici estExt_Genewise1.C_70435 N 0.000
PITG_06748 Phytophthora infestans PITG_06748 N 0.000
fgenesh_scip_prom.46568.4406 Phytophthora kernoviae fgenesh_scip_prom.46568.4406 N 0.000
fgenesh_scip_prom.28083.5589 Phytophthora lateralis fgenesh_scip_prom.28083.5589 N 0.000
F443_08670 Phytophthora parasitica F443_08670 N 0.000
Phyra86538 Phytophthora ramorum Phyra86538 N 0.000
Physo140839 Phytophthora sojae Physo140839 N 0.000
maker-pag1_scaffold_818-snap-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_818-snap-gene-0.3 N 0.000
maker-pir_contig_67-snap-gene-0.23 Pythium irregulare maker-pir_contig_67-snap-gene-0.23 N 0.000
PYU1_G010470 Pythium ultimum PYU1_G010470 N 0.000
maker-pve_contig_870-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_870-fgenesh-gene-0.0 N 0.000