CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE00192
(
Caenorhabditis remanei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CRE00192
T084954_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.820
0.957
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN
NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.766
0.812
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE00192
C2H2 ZF
125
147
FICQYCQRHFTKSYNLLIHERTH
CRE00192
C2H2 ZF
153
175
YSCDVCGKAFRRQDHLRDHKYIH
CRE00192
C2H2 ZF
181
203
FKCELCGKGFCQSRTLLVHRATH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis remanei
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_038710
Albugo laibachii
ALNC14_038710
N
0.000
ALNC14_045170
Albugo laibachii
ALNC14_045170
N
0.000
HpaG811065
Hyaloperonospora arabidopsidis
HpaG811065
N
0.000
estExt_Genewise1.C_70435
Phytophthora capsici
estExt_Genewise1.C_70435
N
0.000
PITG_06748
Phytophthora infestans
PITG_06748
N
0.000
fgenesh_scip_prom.46568.4406
Phytophthora kernoviae
fgenesh_scip_prom.46568.4406
N
0.000
fgenesh_scip_prom.28083.5589
Phytophthora lateralis
fgenesh_scip_prom.28083.5589
N
0.000
F443_08670
Phytophthora parasitica
F443_08670
N
0.000
Phyra86538
Phytophthora ramorum
Phyra86538
N
0.000
Physo140839
Phytophthora sojae
Physo140839
N
0.000
maker-pag1_scaffold_818-snap-gene-0.3
Pythium aphanidermatum
maker-pag1_scaffold_818-snap-gene-0.3
N
0.000
maker-pir_contig_67-snap-gene-0.23
Pythium irregulare
maker-pir_contig_67-snap-gene-0.23
N
0.000
PYU1_G010470
Pythium ultimum
PYU1_G010470
N
0.000
maker-pve_contig_870-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_870-fgenesh-gene-0.0
N
0.000