CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EFV47990
(
Trichinella spiralis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
EFV47990
T085692_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFV47990
C2H2 ZF
40
54
LACSLCGKHFTSINA
EFV47990
C2H2 ZF
90
112
ACLLCSRSFTTFAGLCLHEKRAH
Links
Other
C2H2 ZF
family TFs
Other
Trichinella spiralis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr2.LjT01H08.70.nc
Lotus japonicus
chr2.LjT01H08.70.nc
N
GSMUA_Achr7G12440_001
Musa acuminata
GSMUA_Achr7G12440_001
N
OBART06G09580
Oryza barthii
OBART06G09580
N
ORGLA06G0090600
Oryza glaberrima
ORGLA06G0090600
N
OGLUM06G10380
Oryza glumaepatula
OGLUM06G10380
N
ONIVA06G11110
Oryza nivara
ONIVA06G11110
N
OPUNC06G09140
Oryza punctata
OPUNC06G09140
N
ORUFI06G09920
Oryza rufipogon
ORUFI06G09920
N
GRMZM2G307823
Zea mays
GRMZM2G307823
N
GRMZM2G409627
Zea mays
GRMZM2G409627
N