ZKSCAN1 (Choloepus hoffmanni)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCHOG00000008882 T088929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN1
M05847_2.00 		Homo sapiens
NNNCCTACTAHGH
DCDTAGTAGGNNN		 SMiLE-seq
Isakova et al.(2017)
ZKSCAN1 		0.827 1.000
ZKSCAN1
M08874_2.00 		Homo sapiens
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH		 Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B 		0.827 1.000
Zkscan1
M00771_2.00 		Mus musculus
NNNHDHDNNN
NNNHDHDNNN		 PBM
Weirauch et al.(2013)
pTH2280 		0.825 0.993
Zkscan1
M08985_2.00 		Mus musculus
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH		 Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A 		0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000007855 C2H2 ZF 378 400
ENSCHOP00000007855 C2H2 ZF 406 428
ENSCHOP00000007855 C2H2 ZF 434 456
ENSCHOP00000007855 C2H2 ZF 462 484
ENSCHOP00000007855 C2H2 ZF 490 512
ENSCHOP00000007855 C2H2 ZF 518 540

Links

Other C2H2 ZF family TFs
Other Choloepus hoffmanni TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GF25276 Drosophila ananassae FBgn0102268 I
GG15515 Drosophila erecta FBgn0107763 I
GH14859 Drosophila grimshawi FBgn0122335 I
CG7368 Drosophila melanogaster FBgn0036179 D
GI13709 Drosophila mojavensis FBgn0136464 I
GL22806 Drosophila persimilis FBgn0160397 I
GA20302 Drosophila pseudoobscura FBgn0080297 I
GM25284 Drosophila sechellia FBgn0180144 I
GD14315 Drosophila simulans FBgn0186000 I
GJ14051 Drosophila virilis FBgn0201269 I
GE21828 Drosophila yakuba FBgn0239071 I
LCUP004910 Lucilia cuprina LCUP004910 I
MDOA000812 Musca domestica MDOA000812 I