ENSCING00000021903 (Ciona intestinalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCING00000021903 T089139_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.767 0.809
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.767 0.809
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.767 0.809
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.767 0.809
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.758 0.774
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.758 0.774
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.758 0.774
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.758 0.774
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000030745 C2H2 ZF 171 193
ENSCINP00000030745 C2H2 ZF 199 221
ENSCINP00000030745 C2H2 ZF 227 249
ENSCINP00000030745 C2H2 ZF 255 277
ENSCINP00000030745 C2H2 ZF 283 305

Links

Other C2H2 ZF family TFs
Other Ciona intestinalis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BAUCODRAFT_339570 Baudoinia compniacensis BAUCODRAFT_339570 N
HMPREF1541_07194 Cyphellophora europaea HMPREF1541_07194 N
DOTSEDRAFT_126119 Dothistroma septosporum DOTSEDRAFT_126119 N
LEMA_P068760.1 Leptosphaeria maculans LEMA_P068760.1 N
MPH_09751 Macrophomina phaseolina MPH_09751 N
fgenesh1_pg.C_scaffold_48000027 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_48000027 N
gw1.1.4236.1 Mycosphaerella graminicola gw1.1.4236.1 N
MYCFIDRAFT_196499 Pseudocercospora fijiensis MYCFIDRAFT_196499 N
SETTUDRAFT_88512 Setosphaeria turcica SETTUDRAFT_88512 N
SEPMUDRAFT_7757 Sphaerulina musiva SEPMUDRAFT_7757 N
Mycgr3G31038 Zymoseptoria tritici Mycgr3G31038 N