ENSCSAG00000018633 (Chlorocebus sabaeus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCSAG00000018633 T090653_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP41
M04597_2.00 		Homo sapiens
NGCTAACTCTCCRYN
NRYGGAGAGTTAGCN		 SELEX
Yin et al.(2017)
ZFP41_FL_HT-SELEX 		0.810 0.946
ZFP41
M04598_2.00 		Homo sapiens
BGCTAACTCTCCRCN
NGYGGAGAGTTAGCV		 SELEX
Yin et al.(2017)
ZFP41_FL_Methyl-HT-SELEX 		0.810 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000018159 C2H2 ZF 87 109
ENSCSAP00000018159 C2H2 ZF 115 137
ENSCSAP00000018159 C2H2 ZF 143 165
ENSCSAP00000018159 C2H2 ZF 171 193

Links

Other C2H2 ZF family TFs
Other Chlorocebus sabaeus TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G22907 Brachypodium distachyon BRADI1G22907 N
MLOC_1442 Hordeum vulgare MLOC_1442 N
LPERR07G17920 Leersia perrieri LPERR07G17920 N
GSMUA_Achr10G11390_001 Musa acuminata GSMUA_Achr10G11390_001 N
GSMUA_Achr6G16880_001 Musa acuminata GSMUA_Achr6G16880_001 N
OBART07G20610 Oryza barthii OBART07G20610 N
ORGLA07G0157800 Oryza glaberrima ORGLA07G0157800 N
OGLUM07G20390 Oryza glumaepatula OGLUM07G20390 N
BGIOSGA026051 Oryza indica BGIOSGA026051 N
OLONG_026960 Oryza longistaminata OLONG_026960 N
ONIVA07G19060 Oryza nivara ONIVA07G19060 N
OPUNC07G19470 Oryza punctata OPUNC07G19470 N
ORUFI07G21470 Oryza rufipogon ORUFI07G21470 N
OS07G0589200 Oryza sativa OS07G0589200 N
Pavir.J20144 Panicum virgatum Pavir.J20144 N
Si029796m.g Setaria italica Si029796m.g N
Sb02g038040 Sorghum bicolor Sb02g038040 N
Traes_2AS_E17243D52 Triticum aestivum Traes_2AS_E17243D52 N
Traes_2BS_FDABA21A7 Triticum aestivum Traes_2BS_FDABA21A7 N
Traes_2DS_FB1D2D1A7 Triticum aestivum Traes_2DS_FB1D2D1A7 N
GRMZM2G125501 Zea mays GRMZM2G125501 N
GRMZM2G097456 Zea mays GRMZM2G097456 N