CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr6G16880_001
(
Musa acuminata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GSMUA_Achr6G16880_001
T200382_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr6P16880_001
GRAS
59
455
MEQLLIHFANAIESNDATLAQQILWVLNNIAPPDGDCNQRLTSAFLRALVARASRTGSCKILTAVAARADAELALHLHRFSAIDLANFIDLTPWHRFGYAAANAAIAEAVEGLPLVHIVDLSTTHCMQMPTLIDLLANRPEGPPFIRLTVSGLTTTAAPPILNMTYDELGSRLVNFARSRNVAMEFVVIPTDPSDAFVSLIEQLRVQQLVSEGEALIVNCQMLLHYIPEETVGVIASTTNVSPPMLSLRTLFLKALRSLGPTLVTVVDEDADFTACDVVRRLRSAFNYLWIPYDAVDTFLPKGSEQRRWYEAGVGWKIENVIAEEGVQRVERLERKGRWAQRMRATGFRSVRFTEEAAGEVKSMLDEHAAGWGMKRDEEDLMLTWKGHNVVFATAWL
Links
Other
GRAS
family TFs
Other
Musa acuminata
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr10G11390_001
Musa acuminata
GSMUA_Achr10G11390_001
N
0.854
Traes_2AS_E17243D52
Triticum aestivum
Traes_2AS_E17243D52
N
0.837
Traes_2AS_960C7E44E
Triticum aestivum
Traes_2AS_960C7E44E
N
0.769
GSMUA_Achr6G07790_001
Musa acuminata
GSMUA_Achr6G07790_001
N
0.760
Traes_2DS_FB1D2D1A7
Triticum aestivum
Traes_2DS_FB1D2D1A7
N
0.745
OBART07G20610
Oryza barthii
OBART07G20610
N
0.715
ORGLA07G0157800
Oryza glaberrima
ORGLA07G0157800
N
0.715
OS07G0589200
Oryza sativa
OS07G0589200
N
0.714
ORUFI07G21470
Oryza rufipogon
ORUFI07G21470
N
0.712
VIT_07s0129g00340
Vitis vinifera
VIT_07s0129g00340
N
0.712
Aquca_042_00139
Aquilegia coerulea
Aquca_042_00139
N
0.712
BGIOSGA026051
Oryza indica
BGIOSGA026051
N
0.710
OGLUM07G20390
Oryza glumaepatula
OGLUM07G20390
N
0.710
ONIVA07G19060
Oryza nivara
ONIVA07G19060
N
0.710
gene05720-v1.0-hybrid
Fragaria vesca
gene05720-v1.0-hybrid
N
0.710
OPUNC07G19470
Oryza punctata
OPUNC07G19470
N
0.709
GRMZM2G125501
Zea mays
GRMZM2G125501
N
0.708
OMERI07G17280
Oryza meridionalis
OMERI07G17280
N
0.707
Si029796m.g
Setaria italica
Si029796m.g
N
0.707
GRMZM2G097456
Zea mays
GRMZM2G097456
N
0.704
Sb02g038040
Sorghum bicolor
Sb02g038040
N
0.704
MDP0000247514
Malus domestica
MDP0000247514
N
0.702