klf9 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000068194 T090996_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Klf9
M00777_2.00 		Mus musculus
NCCGTTAN
NTAACGGN		 PBM
Weirauch et al.(2013)
pTH2353 		0.775 0.855
KLF9
M08088_2.00 		Homo sapiens
NVMCACACCCMBN
NVKGGGTGTGKBN		 ChIP-seq
Mathelier et al.(2014)
MA1107.1 		0.775 0.855
KLF9
M08880_2.00 		Homo sapiens
NGCCMCGCCCMCBBS
SVVGKGGGCGKGGCN		 Misc
Kulakovskiy et al.(2013)
KLF9_HUMAN.H11MO.0.C 		0.775 0.855
Klf9
M10345_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB1_01 		0.775 0.855
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000089244 C2H2 ZF 99 123
ENSDARP00000089244 C2H2 ZF 129 153
ENSDARP00000089244 C2H2 ZF 159 181

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05348 Aegilops tauschii F775_05348 I
F775_25655 Aegilops tauschii F775_25655 I
AMTR_s00010p00261750 Amborella trichopoda AMTR_s00010p00261750 I
Aquca_002_00594 Aquilegia coerulea Aquca_002_00594 I
Aquca_009_00018 Aquilegia coerulea Aquca_009_00018 I
Aquca_014_00947 Aquilegia coerulea Aquca_014_00947 I
ATY13 Arabidopsis lyrata fgenesh2_kg.2__1732__AT1G74650.1 I
ATMYB30 Arabidopsis lyrata fgenesh2_kg.5__652__AT3G28910.1 I
MYB96 Arabidopsis lyrata fgenesh2_kg.8__2239__AT5G62470.1 I
MYB60 Arabidopsis lyrata scaffold_100910.1 I
MYB94 Arabidopsis lyrata scaffold_501696.1 I
MYB60 Arabidopsis thaliana AT1G08810 D
ATY13 Arabidopsis thaliana AT1G74650 D
MYB30 Arabidopsis thaliana AT3G28910 D
MYB94 Arabidopsis thaliana AT3G47600 D
MYB96 Arabidopsis thaliana AT5G62470 D
Bostr.0556s0539 Boechera stricta Bostr.0556s0539 I
Bostr.0568s0561 Boechera stricta Bostr.0568s0561 I
Bostr.18473s0197 Boechera stricta Bostr.18473s0197 I
Bostr.25219s0065 Boechera stricta Bostr.25219s0065 I
Bostr.3288s0110 Boechera stricta Bostr.3288s0110 I
BRADI1G20540 Brachypodium distachyon BRADI1G20540 I
BRADI1G61160 Brachypodium distachyon BRADI1G61160 I
BRADI3G37047 Brachypodium distachyon BRADI3G37047 I
BRADI4G16290 Brachypodium distachyon BRADI4G16290 I
BRADI4G22637 Brachypodium distachyon BRADI4G22637 I
BRADI4G26180 Brachypodium distachyon BRADI4G26180 I
BRADI4G30220 Brachypodium distachyon BRADI4G30220 I
BRADI4G43937 Brachypodium distachyon BRADI4G43937 I
Bo1g090540 Brassica oleracea Bo1g090540 I
Bo2g082270 Brassica oleracea Bo2g082270 I
Bo2g146540 Brassica oleracea Bo2g146540 I
Bo2g164160 Brassica oleracea Bo2g164160 I
Bo3g107600 Brassica oleracea Bo3g107600 I
Bo5g009290 Brassica oleracea Bo5g009290 I
Bo6g086910 Brassica oleracea Bo6g086910 I
Bo6g118860 Brassica oleracea Bo6g118860 I
Bo7g087050 Brassica oleracea Bo7g087050 I
Bo8g058040 Brassica oleracea Bo8g058040 I
Bo9g008700 Brassica oleracea Bo9g008700 I
Bo9g014980 Brassica oleracea Bo9g014980 I
Bra003793 Brassica rapa Bra003793 I
Bra008160 Brassica rapa Bra008160 I
Bra010085 Brassica rapa Bra010085 I
Bra015899 Brassica rapa Bra015899 I
Bra018598 Brassica rapa Bra018598 I
Bra025361 Brassica rapa Bra025361 I
Bra029258 Brassica rapa Bra029258 I
Bra030743 Brassica rapa Bra030743 I
Bra033067 Brassica rapa Bra033067 I
Bra035893 Brassica rapa Bra035893 I
Bra039040 Brassica rapa Bra039040 I
PK07857.1 Cannabis sativa PK07857.1 I
PK20858.1 Cannabis sativa PK20858.1 I
Cagra.0402s0061 Capsella grandiflora Cagra.0402s0061 I
Cagra.1659s0003 Capsella grandiflora Cagra.1659s0003 I
Cagra.3206s0001 Capsella grandiflora Cagra.3206s0001 I
Cagra.4003s0035 Capsella grandiflora Cagra.4003s0035 I
Cagra.4395s0068 Capsella grandiflora Cagra.4395s0068 I
Carubv10009957m.g Capsella rubella Carubv10009957m.g I
Carubv10017612m.g Capsella rubella Carubv10017612m.g I
Carubv10017640m.g Capsella rubella Carubv10017640m.g I
Carubv10020618m.g Capsella rubella Carubv10020618m.g I
Carubv10026666m.g Capsella rubella Carubv10026666m.g I
evm.TU.contig_30144 Carica papaya evm.TU.contig_30144 I
evm.TU.supercontig_111.6 Carica papaya evm.TU.supercontig_111.6 I
evm.TU.supercontig_73.13 Carica papaya evm.TU.supercontig_73.13 I
Ca_08170 Cicer arietinum Ca_08170 I
Ca_10518 Cicer arietinum Ca_10518 I
Ca_18699 Cicer arietinum Ca_18699 I
Ca_24550 Cicer arietinum Ca_24550 I
Cla010500 Citrullus lanatus Cla010500 I
Cla017280 Citrullus lanatus Cla017280 I
Cla017736 Citrullus lanatus Cla017736 I
Cla018893 Citrullus lanatus Cla018893 I
Cla019407 Citrullus lanatus Cla019407 I
Ciclev10012152m.g Citrus clementina Ciclev10012152m.g I
Ciclev10020967m.g Citrus clementina Ciclev10020967m.g I
Ciclev10031946m.g Citrus clementina Ciclev10031946m.g I
orange1.1g018559m.g Citrus sinensis orange1.1g018559m.g I
orange1.1g018746m.g Citrus sinensis orange1.1g018746m.g I
orange1.1g019307m.g Citrus sinensis orange1.1g019307m.g I
Cucsa.022180 Cucumis sativus Cucsa.022180 I
Cucsa.112760 Cucumis sativus Cucsa.112760 I
Cucsa.158340 Cucumis sativus Cucsa.158340 I
Cucsa.197670 Cucumis sativus Cucsa.197670 I
Cucsa.337320 Cucumis sativus Cucsa.337320 I
Cucsa.338960 Cucumis sativus Cucsa.338960 I
Eucgr.B00502 Eucalyptus grandis Eucgr.B00502 I
Eucgr.J01343 Eucalyptus grandis Eucgr.J01343 I
Eucgr.K01545 Eucalyptus grandis Eucgr.K01545 I
Eucgr.K02470 Eucalyptus grandis Eucgr.K02470 I
Thhalv10004487m.g Eutrema salsugineum Thhalv10004487m.g I
Thhalv10004538m.g Eutrema salsugineum Thhalv10004538m.g I
Thhalv10008426m.g Eutrema salsugineum Thhalv10008426m.g I
Thhalv10010525m.g Eutrema salsugineum Thhalv10010525m.g I
Thhalv10019477m.g Eutrema salsugineum Thhalv10019477m.g I
gene03817-v1.0-hybrid Fragaria vesca gene03817-v1.0-hybrid I
gene26007-v1.0-hybrid Fragaria vesca gene26007-v1.0-hybrid I
GLYMA02G12242 Glycine max GLYMA02G12242 I
GLYMA03G00890 Glycine max GLYMA03G00890 I
GLYMA04G33720 Glycine max GLYMA04G33720 I
GLYMA05G01080 Glycine max GLYMA05G01080 I
GLYMA06G20800 Glycine max GLYMA06G20800 I
GLYMA09G37340 Glycine max GLYMA09G37340 I
GLYMA17G10820 Glycine max GLYMA17G10820 I
GLYMA18G49360 Glycine max GLYMA18G49360 I
GLYMA19G02600 Glycine max GLYMA19G02600 I
GLYMA19G29750 Glycine max GLYMA19G29750 I
Gorai.001G239000 Gossypium raimondii Gorai.001G239000 I
Gorai.006G017400 Gossypium raimondii Gorai.006G017400 I
Gorai.007G037100 Gossypium raimondii Gorai.007G037100 I
Gorai.007G252700 Gossypium raimondii Gorai.007G252700 I
Gorai.008G192900 Gossypium raimondii Gorai.008G192900 I
Gorai.012G054500 Gossypium raimondii Gorai.012G054500 I
Gorai.013G113000 Gossypium raimondii Gorai.013G113000 I
Gorai.013G196800 Gossypium raimondii Gorai.013G196800 I
MLOC_17662 Hordeum vulgare MLOC_17662 I
MLOC_34885 Hordeum vulgare MLOC_34885 I
MLOC_62516 Hordeum vulgare MLOC_62516 I
MLOC_68511 Hordeum vulgare MLOC_68511 I
MLOC_72230 Hordeum vulgare MLOC_72230 I
LPERR03G16640 Leersia perrieri LPERR03G16640 I
LPERR07G20060 Leersia perrieri LPERR07G20060 I
LPERR09G07060 Leersia perrieri LPERR09G07060 I
LPERR11G01330 Leersia perrieri LPERR11G01330 I
LPERR11G13640 Leersia perrieri LPERR11G13640 I
LPERR12G01520 Leersia perrieri LPERR12G01520 I
Lus10002056.g Linum usitatissimum Lus10002056.g I
Lus10005245.g Linum usitatissimum Lus10005245.g I
Lus10008616.g Linum usitatissimum Lus10008616.g I
Lus10009522.g Linum usitatissimum Lus10009522.g I
Lus10015369.g Linum usitatissimum Lus10015369.g I
Lus10020343.g Linum usitatissimum Lus10020343.g I
Lus10024218.g Linum usitatissimum Lus10024218.g I
Lus10030677.g Linum usitatissimum Lus10030677.g I
Lus10042200.g Linum usitatissimum Lus10042200.g I
chr1.CM0023.70.nc Lotus japonicus chr1.CM0023.70.nc I
CM1835.30.nc Lotus japonicus CM1835.30.nc I
MDP0000144744 Malus domestica MDP0000144744 I
MDP0000149102 Malus domestica MDP0000149102 I
MDP0000149535 Malus domestica MDP0000149535 I
MDP0000163673 Malus domestica MDP0000163673 I
MDP0000168550 Malus domestica MDP0000168550 I
MDP0000219359 Malus domestica MDP0000219359 I
MDP0000805075 Malus domestica MDP0000805075 I
cassava15268.m1 Manihot esculenta cassava15268.m1 I
cassava17529.valid.m1 Manihot esculenta cassava17529.valid.m1 I
cassava25941.m1 Manihot esculenta cassava25941.m1 I
cassava31787.valid.m1 Manihot esculenta cassava31787.valid.m1 I
cassava38120.valid.m1 Manihot esculenta cassava38120.valid.m1 I
cassava42727.valid.m1 Manihot esculenta cassava42727.valid.m1 I
MTR_0140s0030 Medicago truncatula MTR_0140s0030 I
MTR_0489s0020 Medicago truncatula MTR_0489s0020 I
MTR_3g039990 Medicago truncatula MTR_3g039990 I
MTR_6g012180 Medicago truncatula MTR_6g012180 I
MTR_7g010210 Medicago truncatula MTR_7g010210 I
MTR_7g087130 Medicago truncatula MTR_7g087130 I
mg015532m Mimulus guttatus mg015532m I
mgf000996m Mimulus guttatus mgf000996m I
mgf003155m Mimulus guttatus mgf003155m I
mgf007515m Mimulus guttatus mgf007515m I
mgf025699m Mimulus guttatus mgf025699m I
GSMUA_Achr10G01620_001 Musa acuminata GSMUA_Achr10G01620_001 I
GSMUA_Achr10G01640_001 Musa acuminata GSMUA_Achr10G01640_001 I
GSMUA_Achr10G29210_001 Musa acuminata GSMUA_Achr10G29210_001 I
GSMUA_Achr11G13080_001 Musa acuminata GSMUA_Achr11G13080_001 I
GSMUA_Achr2G22010_001 Musa acuminata GSMUA_Achr2G22010_001 I
GSMUA_Achr3G09450_001 Musa acuminata GSMUA_Achr3G09450_001 I
GSMUA_Achr4G00480_001 Musa acuminata GSMUA_Achr4G00480_001 I
GSMUA_Achr5G07720_001 Musa acuminata GSMUA_Achr5G07720_001 I
GSMUA_Achr6G02690_001 Musa acuminata GSMUA_Achr6G02690_001 I
GSMUA_Achr6G10700_001 Musa acuminata GSMUA_Achr6G10700_001 I
GSMUA_Achr7G18080_001 Musa acuminata GSMUA_Achr7G18080_001 I
GSMUA_Achr7G21010_001 Musa acuminata GSMUA_Achr7G21010_001 I
GSMUA_Achr7G21670_001 Musa acuminata GSMUA_Achr7G21670_001 I
GSMUA_Achr8G01400_001 Musa acuminata GSMUA_Achr8G01400_001 I
GSMUA_Achr8G16920_001 Musa acuminata GSMUA_Achr8G16920_001 N
GSMUA_Achr9G17050_001 Musa acuminata GSMUA_Achr9G17050_001 I
GSMUA_AchrUn_randomG02160_001 Musa acuminata GSMUA_AchrUn_randomG02160_001 I
OBART07G20460 Oryza barthii OBART07G20460 I
OBART11G17080 Oryza barthii OBART11G17080 I
OBART12G01420 Oryza barthii OBART12G01420 I
OB03G28590 Oryza brachyantha OB03G28590 I
OB07G28650 Oryza brachyantha OB07G28650 I
OB08G23440 Oryza brachyantha OB08G23440 I
OB09G16780 Oryza brachyantha OB09G16780 I
OB11G11290 Oryza brachyantha OB11G11290 I
OB11G23060 Oryza brachyantha OB11G23060 I
OB12G11580 Oryza brachyantha OB12G11580 I
ORGLA03G0181800 Oryza glaberrima ORGLA03G0181800 I
ORGLA07G0180600 Oryza glaberrima ORGLA07G0180600 I
ORGLA09G0181800 Oryza glaberrima ORGLA09G0181800 I
ORGLA11G0142700 Oryza glaberrima ORGLA11G0142700 I
ORGLA12G0012300 Oryza glaberrima ORGLA12G0012300 I
OGLUM03G19910 Oryza glumaepatula OGLUM03G19910 I
OGLUM07G23120 Oryza glumaepatula OGLUM07G23120 I
OGLUM11G16540 Oryza glumaepatula OGLUM11G16540 I
OGLUM12G01990 Oryza glumaepatula OGLUM12G01990 I
BGIOSGA012748 Oryza indica BGIOSGA012748 I
BGIOSGA023865 Oryza indica BGIOSGA023865 I
BGIOSGA028729 Oryza indica BGIOSGA028729 I
BGIOSGA028730 Oryza indica BGIOSGA028730 I
BGIOSGA030751 Oryza indica BGIOSGA030751 I
BGIOSGA033804 Oryza indica BGIOSGA033804 I
BGIOSGA034582 Oryza indica BGIOSGA034582 I
BGIOSGA036717 Oryza indica BGIOSGA036717 I
OMERI03G17500 Oryza meridionalis OMERI03G17500 I
OMERI07G19460 Oryza meridionalis OMERI07G19460 I
OMERI09G08010 Oryza meridionalis OMERI09G08010 I
OMERI11G13390 Oryza meridionalis OMERI11G13390 I
OMERI12G00580 Oryza meridionalis OMERI12G00580 I
ONIVA03G19990 Oryza nivara ONIVA03G19990 I
ONIVA07G22680 Oryza nivara ONIVA07G22680 I
ONIVA09G09810 Oryza nivara ONIVA09G09810 I
ONIVA11G17090 Oryza nivara ONIVA11G17090 I
OPUNC03G18230 Oryza punctata OPUNC03G18230 I
OPUNC09G08780 Oryza punctata OPUNC09G08780 I
OPUNC11G01450 Oryza punctata OPUNC11G01450 I
OPUNC11G14030 Oryza punctata OPUNC11G14030 I
OPUNC12G01500 Oryza punctata OPUNC12G01500 I
ORUFI07G24230 Oryza rufipogon ORUFI07G24230 I
ORUFI09G10920 Oryza rufipogon ORUFI09G10920 I
ORUFI12G01670 Oryza rufipogon ORUFI12G01670 I
OS07G0629000 Oryza sativa OS07G0629000 I
OS08G0437300 Oryza sativa OS08G0437300 I
OS11G0128500 Oryza sativa OS11G0128500 I
OS11G0558200 Oryza sativa OS11G0558200 I
OS12G0125000 Oryza sativa OS12G0125000 I
Pavir.Ba01835 Panicum virgatum Pavir.Ba01835 I
Pavir.Bb02186 Panicum virgatum Pavir.Bb02186 I
Pavir.Bb03412 Panicum virgatum Pavir.Bb03412 I
Pavir.Fa00895 Panicum virgatum Pavir.Fa00895 I
Pavir.Fb01648 Panicum virgatum Pavir.Fb01648 I
Pavir.Hb00732 Panicum virgatum Pavir.Hb00732 I
Pavir.J10894 Panicum virgatum Pavir.J10894 I
Pavir.J27229 Panicum virgatum Pavir.J27229 I
Pavir.J27570 Panicum virgatum Pavir.J27570 I
Pavir.J35695 Panicum virgatum Pavir.J35695 I
PDK_20s1306201g001 Phoenix dactylifera PDK_20s1306201g001 I
PDK_20s1651652g001 Phoenix dactylifera PDK_20s1651652g001 I
POPTR_0004s12530 Populus trichocarpa POPTR_0004s12530 I
POPTR_0013s06390 Populus trichocarpa POPTR_0013s06390 I
POPTR_0017s11880 Populus trichocarpa POPTR_0017s11880 I
POPTR_0019s06290 Populus trichocarpa POPTR_0019s06290 I
Pm015880 Prunus mume Pm015880 I
Pm024912 Prunus mume Pm024912 I
Pm025436 Prunus mume Pm025436 I
PRUPE_ppa007562mg Prunus persica PRUPE_ppa007562mg I
PRUPE_ppa008366mg Prunus persica PRUPE_ppa008366mg I
PRUPE_ppa023776mg Prunus persica PRUPE_ppa023776mg I
29818.m000395 Ricinus communis 29818.m000395 I
30138.m004082 Ricinus communis 30138.m004082 I
SapurV1A.0300s0080 Salix purpurea SapurV1A.0300s0080 I
SapurV1A.0552s0030 Salix purpurea SapurV1A.0552s0030 I
SapurV1A.0849s0010 Salix purpurea SapurV1A.0849s0010 I
SapurV1A.0876s0040 Salix purpurea SapurV1A.0876s0040 I
Si010608m.g Setaria italica Si010608m.g I
Si014183m.g Setaria italica Si014183m.g I
Si026651m.g Setaria italica Si026651m.g I
Si026733m.g Setaria italica Si026733m.g I
Si030560m.g Setaria italica Si030560m.g I
Si038845m.g Setaria italica Si038845m.g I
Solyc02g067340.2 Solanum lycopersicum Solyc02g067340.2 I
Solyc02g087960.2 Solanum lycopersicum Solyc02g087960.2 I
Solyc03g116100.2 Solanum lycopersicum Solyc03g116100.2 I
Solyc06g069850.2 Solanum lycopersicum Solyc06g069850.2 I
Solyc10g081490.1 Solanum lycopersicum Solyc10g081490.1 I
PGSC0003DMG400001325 Solanum tuberosum PGSC0003DMG400001325 I
PGSC0003DMG400006930 Solanum tuberosum PGSC0003DMG400006930 I
PGSC0003DMG400019535 Solanum tuberosum PGSC0003DMG400019535 I
PGSC0003DMG400028125 Solanum tuberosum PGSC0003DMG400028125 I
PGSC0003DMG400033043 Solanum tuberosum PGSC0003DMG400033043 I
Sb02g024640 Sorghum bicolor Sb02g024640 I
Sb02g040160 Sorghum bicolor Sb02g040160 I
Sb05g001730 Sorghum bicolor Sb05g001730 I
Sb05g021820 Sorghum bicolor Sb05g021820 I
Sb07g021420 Sorghum bicolor Sb07g021420 I
Sb07g021430 Sorghum bicolor Sb07g021430 I
Sb08g001800 Sorghum bicolor Sb08g001800 I
TCM_013983 Theobroma cacao TCM_013983 I
TCM_018538 Theobroma cacao TCM_018538 I
TCM_025795 Theobroma cacao TCM_025795 I
Traes_4AL_7800B74E3 Triticum aestivum Traes_4AL_7800B74E3 I
Traes_4AL_D05736670 Triticum aestivum Traes_4AL_D05736670 I
Traes_4BS_5690C215A Triticum aestivum Traes_4BS_5690C215A I
Traes_4DS_90B64301A Triticum aestivum Traes_4DS_90B64301A I
Traes_5BL_3C4ECAB6D Triticum aestivum Traes_5BL_3C4ECAB6D I
Traes_5BL_557E7700B Triticum aestivum Traes_5BL_557E7700B I
Traes_5BL_632EBAD09 Triticum aestivum Traes_5BL_632EBAD09 I
Traes_5DL_1CD39D4D0 Triticum aestivum Traes_5DL_1CD39D4D0 I
Traes_5DL_1D036F8B5 Triticum aestivum Traes_5DL_1D036F8B5 I
Traes_5DL_36CD3229A Triticum aestivum Traes_5DL_36CD3229A I
TRIUR3_10415 Triticum urartu TRIUR3_10415 I
TRIUR3_20609 Triticum urartu TRIUR3_20609 I
TRIUR3_22271 Triticum urartu TRIUR3_22271 I
MYB60 Vitis vinifera VIT_08s0056g00800 I
ATMYB30 Vitis vinifera VIT_14s0108g00830 I
VIT_17s0000g06190 Vitis vinifera VIT_17s0000g06190 I
AC165178.2_FG004 Zea mays AC165178.2_FG004 I
AC197146.3_FG002 Zea mays AC197146.3_FG002 I
GRMZM2G024468 Zea mays GRMZM2G024468 I
GRMZM2G045748 Zea mays GRMZM2G045748 I
GRMZM2G056407 Zea mays GRMZM2G056407 I
GRMZM2G098179 Zea mays GRMZM2G098179 I
GRMZM2G108959 Zea mays GRMZM2G108959 I
GRMZM2G131937 Zea mays GRMZM2G131937 I
GRMZM2G139284 Zea mays GRMZM2G139284 I
GRMZM2G162434 Zea mays GRMZM2G162434 I
GRMZM2G172487 Zea mays GRMZM2G172487 I
GRMZM2G172575 Zea mays GRMZM2G172575 I