BCL11B (Dasypus novemcinctus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDNOG00000012677 T092156_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.827 1.000
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.827 1.000
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.806 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.806 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDNOP00000009831 C2H2 ZF 431 452
ENSDNOP00000009831 C2H2 ZF 458 480
ENSDNOP00000009831 C2H2 ZF 788 810
ENSDNOP00000009831 C2H2 ZF 816 838
ENSDNOP00000009831 C2H2 ZF 846 869

Links

Other C2H2 ZF family TFs
Other Dasypus novemcinctus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_023_00033 Aquilegia coerulea Aquca_023_00033 N
Bostr.25463s0361 Boechera stricta Bostr.25463s0361 N
PK00213.1 Cannabis sativa PK00213.1 N
Cagra.1008s0003 Capsella grandiflora Cagra.1008s0003 N
evm.TU.supercontig_66.48 Carica papaya evm.TU.supercontig_66.48 N
Ca_04306 Cicer arietinum Ca_04306 N
Cla012103 Citrullus lanatus Cla012103 N
Ciclev10002467m.g Citrus clementina Ciclev10002467m.g N
orange1.1g028218m.g Citrus sinensis orange1.1g028218m.g N
Cucsa.088330 Cucumis sativus Cucsa.088330 N
Eucgr.F04126 Eucalyptus grandis Eucgr.F04126 N
Thhalv10028979m.g Eutrema salsugineum Thhalv10028979m.g N
gene29104-v1.0-hybrid Fragaria vesca gene29104-v1.0-hybrid N
GLYMA20G31580 Glycine max GLYMA20G31580 N
GLYMA10G36001 Glycine max GLYMA10G36001 N
Gorai.005G074700 Gossypium raimondii Gorai.005G074700 N
Lus10009420.g Linum usitatissimum Lus10009420.g N
Lus10028701.g Linum usitatissimum Lus10028701.g N
chr5.LjT08L18.190.nd Lotus japonicus chr5.LjT08L18.190.nd N
cassava25358.m1 Manihot esculenta cassava25358.m1 N
MTR_1g096340 Medicago truncatula MTR_1g096340 N
mgf002286m Mimulus guttatus mgf002286m N
OBART03G40280 Oryza barthii OBART03G40280 N
ORGLA03G0371400 Oryza glaberrima ORGLA03G0371400 N
OGLUM03G40150 Oryza glumaepatula OGLUM03G40150 N
BGIOSGA009486 Oryza indica BGIOSGA009486 N
OLONG_012145 Oryza longistaminata OLONG_012145 N
ONIVA03G42160 Oryza nivara ONIVA03G42160 N
OPUNC03G37490 Oryza punctata OPUNC03G37490 N
OPUNC03G37470 Oryza punctata OPUNC03G37470 N
ORUFI03G42080 Oryza rufipogon ORUFI03G42080 N
OS03G0838900 Oryza sativa OS03G0838900 N
Pavir.J01833 Panicum virgatum Pavir.J01833 N
Pavir.Ia00190 Panicum virgatum Pavir.Ia00190 N
POPTR_0013s11780 Populus trichocarpa POPTR_0013s11780 N
Pm022190 Prunus mume Pm022190 N
29728.m000821 Ricinus communis 29728.m000821 N
SapurV1A.0179s0060 Salix purpurea SapurV1A.0179s0060 N
Solyc11g017430.1 Solanum lycopersicum Solyc11g017430.1 N
PGSC0003DMG400009226 Solanum tuberosum PGSC0003DMG400009226 N
Sb01g001940 Sorghum bicolor Sb01g001940 N
TCM_036345 Theobroma cacao TCM_036345 N
VIT_18s0072g01130 Vitis vinifera VIT_18s0072g01130 N