Pavir.Ia00190 (Panicum virgatum)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Pavir.Ia00190 T265062_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia00190.1.p mTERF 144 231

Links

Other mTERF family TFs
Other Panicum virgatum TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J01833 Panicum virgatum Pavir.J01833 N 0.973
Sb01g001940 Sorghum bicolor Sb01g001940 N 0.971
BGIOSGA009486 Oryza indica BGIOSGA009486 N 0.905
OBART03G40280 Oryza barthii OBART03G40280 N 0.905
OGLUM03G40150 Oryza glumaepatula OGLUM03G40150 N 0.905
OLONG_012145 Oryza longistaminata OLONG_012145 N 0.905
ONIVA03G42160 Oryza nivara ONIVA03G42160 N 0.905
OPUNC03G37470 Oryza punctata OPUNC03G37470 N 0.905
ORGLA03G0371400 Oryza glaberrima ORGLA03G0371400 N 0.905
OS03G0838900 Oryza sativa OS03G0838900 N 0.905
ORUFI03G42080 Oryza rufipogon ORUFI03G42080 N 0.892
OPUNC03G37490 Oryza punctata OPUNC03G37490 N 0.878
MLOC_10423 Hordeum vulgare MLOC_10423 N 0.797
cassava25358.m1 Manihot esculenta cassava25358.m1 N 0.743
Ca_04306 Cicer arietinum Ca_04306 N 0.716
29728.m000821 Ricinus communis 29728.m000821 N 0.716
Gorai.005G074700 Gossypium raimondii Gorai.005G074700 N 0.716
Aquca_023_00033 Aquilegia coerulea Aquca_023_00033 N 0.712
Thhalv10028979m.g Eutrema salsugineum Thhalv10028979m.g N 0.712
MTR_1g096340 Medicago truncatula MTR_1g096340 N 0.703
PRUPE_ppa026991mg Prunus persica PRUPE_ppa026991mg N 0.703
mgf002286m Mimulus guttatus mgf002286m N 0.700
Cagra.1008s0003 Capsella grandiflora Cagra.1008s0003 N 0.700