CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZKSCAN3
(
Dasypus novemcinctus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDNOG00000033262
T092288_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN3
M02923_2.00
Homo sapiens
TCGAGGYTAGMCCA
TGGKCTARCCTCGA
SELEX
Jolma et al.(2013)
ZNF306_1
0.800
0.950
ZKSCAN3
M07696_2.00
Homo sapiens
GGCTAGMCC
GGKCTAGCC
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN3.RCADE.OriginalMapping
0.800
0.950
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000019454
C2H2 ZF
322
344
HYCHECGKSFAQSSGLSKHRRIH
ENSDNOP00000019454
C2H2 ZF
350
372
YECEECGKAFIGSSALVIHQRVH
ENSDNOP00000019454
C2H2 ZF
378
400
YECEECSKAFSHSSDLIKHQRTH
ENSDNOP00000019454
C2H2 ZF
406
428
YECDDCGKTFSQSCSLLEHHRIH
ENSDNOP00000019454
C2H2 ZF
434
456
YQCNLCGKAFRRSSHLLRHQRIH
ENSDNOP00000019454
C2H2 ZF
490
512
YQCNECERSFIQNTGLIEHQKIH
ENSDNOP00000019454
C2H2 ZF
518
540
YQCDACGKGFTRTSYLVQHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Dasypus novemcinctus
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAM018479
Anopheles maculatus
AMAM018479
N
0.000
ACEP25174
Atta cephalotes
ACEP25174
N
0.000
tetur15g03470
Tetranychus urticae
tetur15g03470
N
0.000
Traes_1DS_5EEED86AD
Triticum aestivum
Traes_1DS_5EEED86AD
N
0.000
Traes_3DS_901181FDD
Triticum aestivum
Traes_3DS_901181FDD
N
0.000