Snai3 (Dipodomys ordii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDORG00000011547 T092855_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI3
M04607_2.00 		Homo sapiens
YRCACCTGYH
DRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI3_FL_HT-SELEX 		0.779 0.867
SNAI3
M04608_2.00 		Homo sapiens
YVCACCTGYH
DRCAGGTGBR		 SELEX
Yin et al.(2017)
SNAI3_FL_Methyl-HT-SELEX 		0.779 0.867
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000010849 C2H2 ZF 123 145
ENSDORP00000010849 C2H2 ZF 154 176
ENSDORP00000010849 C2H2 ZF 180 202
ENSDORP00000010849 C2H2 ZF 208 230
ENSDORP00000010849 C2H2 ZF 236 256

Links

Other C2H2 ZF family TFs
Other Dipodomys ordii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018165 Ailuropoda melanoleuca ENSAMEG00000018165 I
SNAI3 Callithrix jacchus ENSCJAG00000012922 I 0.800
ENSCPOG00000012706 Cavia porcellus ENSCPOG00000012706 I 0.790
ENSCSAG00000003047 Chlorocebus sabaeus ENSCSAG00000003047 I 0.779
SNAI3 Equus caballus ENSECAG00000012131 I 0.779
SNAI3 Gorilla gorilla ENSGGOG00000012559 I 0.779
SNAI3 Homo sapiens ENSG00000185669 D 0.779
ENSSTOG00000021205 Ictidomys tridecemlineatus ENSSTOG00000021205 I 0.783
SNAI3 Loxodonta africana ENSLAFG00000005117 I 0.767
ENSP00000327968 Macaca fascicularis ENSP00000327968 I 0.779
SNAI3 Macaca mulatta ENSMMUG00000008716 I 0.779
Snai3 Mus musculus ENSMUSG00000006587 I 0.788
ENSNLEG00000000595 Nomascus leucogenys ENSNLEG00000000595 I 0.788
SNAI3 Ochotona princeps ENSOPRG00000015227 I 0.756
SNAI3 Oryctolagus cuniculus ENSOCUG00000014852 I 0.775
SNAI3 Pan troglodytes ENSPTRG00000008460 I 0.779
ENSPANG00000000509 Papio anubis ENSPANG00000000509 I 0.779
SNAI3 Pteropus vampyrus ENSPVAG00000017357 I 0.791
Snai3 Rattus norvegicus ENSRNOG00000013586 I 0.766