zbtb42 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000006297 T095599_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB42
M08351_2.00 		Homo sapiens
MRCAKCTGS
SCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
B2RXF5_2-4.RCADE 		0.775 0.879
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000008319 C2H2 ZF 324 346
ENSGACP00000008319 C2H2 ZF 365 386
ENSGACP00000008319 C2H2 ZF 392 414
ENSGACP00000008319 C2H2 ZF 420 443

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
pde191 Arabidopsis thaliana AT4G38160 N
PK01272.1 Cannabis sativa PK01272.1 N
Cagra.1383s0005 Capsella grandiflora Cagra.1383s0005 N
Cla015968 Citrullus lanatus Cla015968 N
Thhalv10004546m.g Eutrema salsugineum Thhalv10004546m.g N
MDP0000296585 Malus domestica MDP0000296585 N
MDP0000756985 Malus domestica MDP0000756985 N
cassava6394.valid.m1 Manihot esculenta cassava6394.valid.m1 N
mgf010879m Mimulus guttatus mgf010879m N
pde191 Populus trichocarpa POPTR_0009s17140 N
Pm020708 Prunus mume Pm020708 N
PRUPE_ppa008508mg Prunus persica PRUPE_ppa008508mg N
SapurV1A.0216s0390 Salix purpurea SapurV1A.0216s0390 N
Solyc11g044360.1 Solanum lycopersicum Solyc11g044360.1 N
PGSC0003DMG400023133 Solanum tuberosum PGSC0003DMG400023133 N