CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400023133
(
Solanum tuberosum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
PGSC0003DMG400023133
T263371_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400059548
mTERF
2
240
VNCLETLGSKPQEVASAITKFPHILAHSVEEKLCPLLGFFEALGVTEKQLGKMILINPRIISYSIEHKLSQMVEFLSSLHLAKDGMIGKVIVKHPYIMGYSVDNRLRPTSEFLKSLGLTDMDLQKVVINYPEVLCRDVNKILQPNLSYLTSRGFGVGQIAAVVTCYPPVLIKSVSNSLEPRIKFLIDVMGRGLDEVVDYPDYFRHSLKRRLQLRQKLLMQKNISCTLSEMLDCNQKKFL
PGSC0003DMT400059549
mTERF
12
321
MWFFKDKGFDDTSINEMFQKCKRLEGVQREKASENWDYLRSIGIQERKLPSVVRKCPKILTLGLHEKLFPMVNCLETLGSKPQEVASAITKFPHILAHSVEEKLCPLLGFFEALGVTEKQLGKMILINPRIISYSIEHKLSQMVEFLSSLHLAKDGMIGKVIVKHPYIMGYSVDNRLRPTSEFLKSLGLTDMDLQKVVINYPEVLCRDVNKILQPNLSYLTSRGFGVGQIAAVVTCYPPVLIKSVSNSLEPRIKFLIDVMGRGLDEVVDYPDYFRHSLKRRLQLRQKLLMQKNISCTLSEMLDCNQKKFL
PGSC0003DMT400059550
mTERF
12
321
MWFFKDKGFDDTSINEMFQKCKRLEGVQREKASENWDYLRSIGIQERKLPSVVRKCPKILTLGLHEKLFPMVNCLETLGSKPQEVASAITKFPHILAHSVEEKLCPLLGFFEALGVTEKQLGKMILINPRIISYSIEHKLSQMVEFLSSLHLAKDGMIGKVIVKHPYIMGYSVDNRLRPTSEFLKSLGLTDMDLQKVVINYPEVLCRDVNKILQPNLSYLTSRGFGVGQIAAVVTCYPPVLIKSVSNSLEPRIKFLIDVMGRGLDEVVDYPDYFRHSLKRRLQLRQKLLMQKNISCTLSEMLDCNQKKFL
Links
Other
mTERF
family TFs
Other
Solanum tuberosum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc11g044360.1
Solanum lycopersicum
Solyc11g044360.1
N
0.980
gene17122-v1.0-hybrid
Fragaria vesca
gene17122-v1.0-hybrid
N
0.735
pde191
Populus trichocarpa
POPTR_0009s17140
N
0.723
cassava6394.valid.m1
Manihot esculenta
cassava6394.valid.m1
N
0.722
mgf010879m
Mimulus guttatus
mgf010879m
N
0.722