CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene17122-v1.0-hybrid
(
Fragaria vesca
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
gene17122-v1.0-hybrid
T264799_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna17122.1-v1.0-hybrid
mTERF
14
324
MWFFRDKGFDDKSISEMFKKCKRLENMNRESASENWAYLESIGIQERKLPSVVSKCPKILTLGLHEKLVPTVECLATLGTKPREVASAIAKFPHILSHSVEEKLCPLLAFFEALGVPQKQLGKMILLNPRLISYSIDTKLKDIVDFLADLGLARDGMIGKVLVKNPFIMGYSVDKRLRPTAEFLKSFGLTEQGIQTVAIHFPEVLCRDVDKILRPNFDFLKRSGFEDGQIAALVTGYPPILIKSIHNSLEPRIKFLVEVMGRRIDEVTDYPDFFRHGLKKKVERRHKLLKQKTTTDCSLSEMLDCNQKKFL
Links
Other
mTERF
family TFs
Other
Fragaria vesca
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa008508mg
Prunus persica
PRUPE_ppa008508mg
N
0.866
Pm020708
Prunus mume
Pm020708
N
0.863
MDP0000296585
Malus domestica
MDP0000296585
N
0.863
pde191
Populus trichocarpa
POPTR_0009s17140
N
0.808
PK01272.1
Cannabis sativa
PK01272.1
N
0.788
cassava6394.valid.m1
Manihot esculenta
cassava6394.valid.m1
N
0.784
MDP0000756985
Malus domestica
MDP0000756985
N
0.769
mgf010879m
Mimulus guttatus
mgf010879m
N
0.742
SapurV1A.0216s0390
Salix purpurea
SapurV1A.0216s0390
N
0.736
PGSC0003DMG400023133
Solanum tuberosum
PGSC0003DMG400023133
N
0.735
Solyc11g044360.1
Solanum lycopersicum
Solyc11g044360.1
N
0.734
Cla015968
Citrullus lanatus
Cla015968
N
0.730
Thhalv10004546m.g
Eutrema salsugineum
Thhalv10004546m.g
N
0.710
Cagra.1383s0005
Capsella grandiflora
Cagra.1383s0005
N
0.707
pde191
Arabidopsis thaliana
AT4G38160
N
0.700