KLF11 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000008836 T095635_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF11
M00242_2.00 		Homo sapiens
MCGCCCCC
GGGGGCGK		 PBM
Barrera et al.(2016)
KLF11_REF 		0.808 0.942
KLF11
M04554_2.00 		Homo sapiens
VMCMCRCCCMYNMCACGCCCMC
GKGGGCGTGKNRKGGGYGKGKB		 SELEX
Yin et al.(2017)
KLF11_eDBD_HT-SELEX 		0.808 0.942
KLF11
M10261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKLF_Q5 		0.808 0.942
KLF11
M00241_2.00 		Homo sapiens
MCGCCCMC
GKGGGCGK		 PBM
Barrera et al.(2016)
KLF11_R402Q 		0.808 0.942
KLF11
M04555_2.00 		Homo sapiens
VMCMCRCCCHYNHCACGCCCMC
GKGGGCGTGDNRDGGGYGKGKB		 SELEX
Yin et al.(2017)
KLF11_eDBD_Methyl-HT-SELEX 		0.808 0.942
KLF10
M04489_2.00 		Homo sapiens
RMCACRCCCMYVHCACRCCCMC
GKGGGYGTGDBRKGGGYGTGKY		 SELEX
Yin et al.(2017)
KLF10_eDBD_HT-SELEX 		0.787 0.884
KLF10
M08246_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 ChIP-seq
Najafabadi et al.(2015b)
KLF10 		0.787 0.884
KLF10
M08317_2.00 		Homo sapiens
SMCMCRCCCMYNBSN
NSVNRKGGGYGKGKS		 ChIP-seq
Schmitges et al.(2016)
Q13118.MEME 		0.787 0.884
KLF10
M10228_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TIEG1_Q6 		0.787 0.884
KLF10
M04490_2.00 		Homo sapiens
RMCACRCCCMYGMCACRCCCHC
GDGGGYGTGKCRKGGGYGTGKY		 SELEX
Yin et al.(2017)
KLF10_eDBD_Methyl-HT-SELEX 		0.787 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000011665 C2H2 ZF 380 404
ENSGACP00000011665 C2H2 ZF 410 434
ENSGACP00000011665 C2H2 ZF 440 462

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_501562.1 Arabidopsis lyrata scaffold_501562.1 N
fgenesh2_kg.8__1893__AT5G59450.1 Arabidopsis lyrata fgenesh2_kg.8__1893__AT5G59450.1 N
SCL11 Arabidopsis thaliana AT5G59450 N
SCL30 Arabidopsis thaliana AT3G46600 N
Bostr.18473s0299 Boechera stricta Bostr.18473s0299 N
Bostr.26833s0299 Boechera stricta Bostr.26833s0299 N
Bo3g132680 Brassica oleracea Bo3g132680 N
Bo3g132720 Brassica oleracea Bo3g132720 N
Bo9g139410 Brassica oleracea Bo9g139410 N
Bo1g070830 Brassica oleracea Bo1g070830 N
Bra002564 Brassica rapa Bra002564 N
Bra033813 Brassica rapa Bra033813 N
Cagra.0448s0009 Capsella grandiflora Cagra.0448s0009 N
Carubv10016909m.g Capsella rubella Carubv10016909m.g N
Carubv10028208m.g Capsella rubella Carubv10028208m.g N
Thhalv10002455m.g Eutrema salsugineum Thhalv10002455m.g N
Thhalv10013016m.g Eutrema salsugineum Thhalv10013016m.g N