ENSLACG00000016612 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000016612 T097151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB37
M04603_2.00 		Homo sapiens
DTCGGCYAABDCGGCAN
NTGCCGHVTTRGCCGAH		 SELEX
Yin et al.(2017)
ZBTB37_eDBD_HT-SELEX 		0.823 0.971
ZBTB37
M04604_2.00 		Homo sapiens
NHRCSRNRNHYACCRYV
BRYGGTRDNYNYSGYDN		 SELEX
Yin et al.(2017)
ZBTB37_eDBD_Methyl-HT-SELEX 		0.823 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000018879 C2H2 ZF 370 392
ENSLACP00000018879 C2H2 ZF 398 420
ENSLACP00000018879 C2H2 ZF 426 449

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HRD Arabidopsis lyrata scaffold_402264.1 I 0.000
ERF024 Arabidopsis thaliana AT2G36450 D 0.000
Bostr.23794s0446 Boechera stricta Bostr.23794s0446 I 0.000
Bo3g030140 Brassica oleracea Bo3g030140 I 0.000
Bo4g034600 Brassica oleracea Bo4g034600 I 0.000
Bo4g186300 Brassica oleracea Bo4g186300 I 0.000
Bra017235 Brassica rapa Bra017235 I 0.000
Cagra.0228s0035 Capsella grandiflora Cagra.0228s0035 I 0.000
Carubv10024954m.g Capsella rubella Carubv10024954m.g I 0.000
Thhalv10017537m.g Eutrema salsugineum Thhalv10017537m.g I 0.000
mgf018102m Mimulus guttatus mgf018102m N 0.000