CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000012759
(
Lepisosteus oculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLOCG00000012759
T097731_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB42
M08351_2.00
Homo sapiens
MRCAKCTGS
SCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
B2RXF5_2-4.RCADE
0.770
0.879
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000015698
C2H2 ZF
383
405
CVCPLCSKVFPSPHVLQLHLSSH
ENSLOCP00000015698
C2H2 ZF
424
445
TCSQCGKTFSCMYTLKRHERTH
ENSLOCP00000015698
C2H2 ZF
451
473
YTCAQCGKSFQYSHNLSRHAVVH
ENSLOCP00000015698
C2H2 ZF
479
502
HACKWCERRFTQSGDLYRHIRKFH
Links
Other
C2H2 ZF
family TFs
Other
Lepisosteus oculatus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo5g118650
Brassica oleracea
Bo5g118650
N
0.000
SELMODRAFT_440103
Selaginella moellendorffii
SELMODRAFT_440103
N
0.000
GRMZM2G111204
Zea mays
GRMZM2G111204
N
0.000