CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gtf3a
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000016503
T101000_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gtf3a
M10338_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFIIIA_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gtf3a
M10364_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFIIIA_02
0.791
0.937
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000115824
C2H2 ZF
38
62
FICSFPDCSASYNKAWKLDAHLCKH
ENSMUSP00000115824
C2H2 ZF
68
92
FVCDYEGCGKAFIRDYHLSRHVLIH
ENSMUSP00000115824
C2H2 ZF
98
123
FVCADDGCNQKFNTKSNLKKHIERKH
ENSMUSP00000115824
C2H2 ZF
130
154
YVCSYEGCKKAFKKHQQLRTHQCQH
ENSMUSP00000115824
C2H2 ZF
160
184
FRCTHEGCGKHFASPSRLKRHGKVH
ENSMUSP00000115824
C2H2 ZF
187
211
YLCQKGCSFMGKTWTELLKHMREAH
ENSMUSP00000115824
C2H2 ZF
215
237
ITCNVCQRMFKRRDYLKQHMKTH
ENSMUSP00000115824
C2H2 ZF
244
269
YRCPRQGCGRTYTTVFNLQSHILSFH
ENSMUSP00000115824
C2H2 ZF
275
299
FVCEHAGCGKTFAMKQSLMRHSVVH
ENSMUSP00000119607
C2H2 ZF
38
62
FICSFPDCSASYNKAWKLDAHLCKH
ENSMUSP00000119607
C2H2 ZF
68
92
FVCDYEGCGKAFIRDYHLSRHVLIH
ENSMUSP00000119607
C2H2 ZF
98
123
FVCADDGCNQKFNTKSNLKKHIERKH
ENSMUSP00000119607
C2H2 ZF
130
154
YVCSYEGCKKAFKKHQQLRTHQCQH
ENSMUSP00000119607
C2H2 ZF
160
184
FRCTHEGCGKHFASPSRLKRHGKVH
ENSMUSP00000119607
C2H2 ZF
187
211
YLCQKGCSFMGKTWTELLKHMREAH
ENSMUSP00000119607
C2H2 ZF
215
237
ITCNVCQRMFKRRDYLKQHMKTH
ENSMUSP00000119607
C2H2 ZF
244
269
YRCPRQGCGRTYTTVFNLQSHILSFH
ENSMUSP00000119607
C2H2 ZF
275
299
FVCEHAGCGKTFAMKQSLMRHSVVH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GTF3A
Canis familiaris
ENSCAFG00000006794
I
0.764
ENSMPUG00000005835
Mustela putorius furo
ENSMPUG00000005835
I
0.758
Myotis_brandtii_GTF3A_10026415
Myotis brandtii
Myotis_brandtii_GTF3A_10026415
I
0.785
GTF3A
Myotis lucifugus
ENSMLUG00000002158
I
0.785
Gtf3a
Rattus norvegicus
ENSRNOG00000050016
D
0.791