ZNF140 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000030665 T103798_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF140
M04621_2.00 		Homo sapiens
DRCAATTCCGCTCN
NGAGCGGAATTGYH		 SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX 		0.810 0.965
ZNF140
M08372_2.00 		Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB
VNNNNNNNNNNNDGRGCRGAATTG		 ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE 		0.810 0.965
ZNF140
M08945_2.00 		Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN
NDGGAGYRGAATTGCWRVRNHNNN		 Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C 		0.810 0.965
ZNF140
M04622_2.00 		Homo sapiens
NRCAATTCCGCTCV
BGAGCGGAATTGYN		 SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX 		0.810 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000017259 C2H2 ZF 158 180
ENSOGAP00000017259 C2H2 ZF 186 208
ENSOGAP00000017259 C2H2 ZF 214 236
ENSOGAP00000017259 C2H2 ZF 242 264
ENSOGAP00000017259 C2H2 ZF 270 292
ENSOGAP00000017259 C2H2 ZF 298 320
ENSOGAP00000017259 C2H2 ZF 326 348
ENSOGAP00000017259 C2H2 ZF 354 376
ENSOGAP00000017259 C2H2 ZF 382 404
ENSOGAP00000017259 C2H2 ZF 410 432

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013250 Ailuropoda melanoleuca ENSAMEG00000013250 I
SALL4 Bos taurus ENSBTAG00000003101 I
ENSCJAG00000000591 Callithrix jacchus ENSCJAG00000000591 I
ENSCAFG00000011738 Canis familiaris ENSCAFG00000011738 I
ENSCSAG00000015269 Chlorocebus sabaeus ENSCSAG00000015269 I
SALL4 Dasypus novemcinctus ENSDNOG00000040633 I
SALL4 Erinaceus europaeus ENSEEUG00000003649 I
SALL4 Felis catus ENSFCAG00000002822 I
SALL4 Gorilla gorilla ENSGGOG00000001832 I
SALL4 Homo sapiens ENSG00000101115 D
ENSSTOG00000025002 Ictidomys tridecemlineatus ENSSTOG00000025002 I
SALL4 Loxodonta africana ENSLAFG00000004309 I
ENSP00000217086 Macaca fascicularis ENSP00000217086 I
SALL4 Macaca mulatta ENSMMUG00000003870 I
SALL4 Microcebus murinus ENSMICG00000000027 I
ENSMPUG00000017543 Mustela putorius furo ENSMPUG00000017543 I
Sall4 Mus musculus ENSMUSG00000027547 D
ENSMLUG00000007060 Myotis lucifugus ENSMLUG00000007060 I
ENSMLUG00000008405 Myotis lucifugus ENSMLUG00000008405 I
ENSNLEG00000007013 Nomascus leucogenys ENSNLEG00000007013 I
SALL4 Ochotona princeps ENSOPRG00000011640 I
SALL4 Oryctolagus cuniculus ENSOCUG00000011797 I
SALL4 Otolemur garnettii ENSOGAG00000013799 I
SALL4 Pan troglodytes ENSPTRG00000013631 I
ENSPANG00000021792 Papio anubis ENSPANG00000021792 I
ENSPPYG00000011138 Pongo abelii ENSPPYG00000011138 I
SALL4 Pteropus vampyrus ENSPVAG00000002075 I
Sall4 Rattus norvegicus ENSRNOG00000050035 I
SALL4 Sus scrofa ENSSSCG00000007479 I
ENSTSYG00000007359 Tarsius syrichta ENSTSYG00000007359 I
SALL4 Tursiops truncatus ENSTTRG00000007753 I