ENSONIG00000002719 (Oreochromis niloticus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSONIG00000002719 T103956_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.778 0.848
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.778 0.848
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.778 0.848
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.778 0.848
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.778 0.848
ref-2
M00621_2.00 		Caenorhabditis elegans
CMYRSNGNBH
DVNCNSYRKG		 PBM
Narasimhan et al.(2015)
pTH9089 		0.762 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000003408 C2H2 ZF 261 288
ENSONIP00000003408 C2H2 ZF 294 318
ENSONIP00000003408 C2H2 ZF 326 350
ENSONIP00000003408 C2H2 ZF 356 380

Links

Other C2H2 ZF family TFs
Other Oreochromis niloticus TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g03519 Acanthocheilonema viteae nAv.1.0.1.g03519 N 0.000
ALUE_0000320001 Ascaris lumbricoides ALUE_0000320001 N 0.000
ASU_09694 Ascaris suum ASU_09694 N 0.000
Bm5193 Brugia malayi Bm5193 N 0.000
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf15800-processed-gene-0.1 N 0.000
TCNE_0001837201 Toxocara canis TCNE_0001837201 N 0.000