ENSONIG00000013011 (Oreochromis niloticus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSONIG00000013011 T104178_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GFI1B
M00240_2.00 		Homo sapiens
NNAAATCWSDN
NHSWGATTTNN		 PBM
Barrera et al.(2016)
GFI1B_REF 		0.785 0.877
GFI1B
M04523_2.00 		Homo sapiens
NMAATCASDGCNNBBCACTNN
NNAGTGVVNNGCHSTGATTKN		 SELEX
Yin et al.(2017)
GFI1B_eDBD_HT-SELEX 		0.785 0.877
GFI1B
M08909_2.00 		Homo sapiens
MAATCWSDGY
RCHSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1B_HUMAN.H11MO.0.A 		0.785 0.877
GFI1B
M10243_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1B_01 		0.785 0.877
GFI1B
M10244_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1B_Q6 		0.785 0.877
GFI1B
M04524_2.00 		Homo sapiens
NMAATCASWGCDNNBCACTHN
NDAGTGVNNHGCWSTGATTKN		 SELEX
Yin et al.(2017)
GFI1B_eDBD_Methyl-HT-SELEX 		0.785 0.877
Gfi1b
M08098_2.00 		Mus musculus
MAATCWCWGCH
DGCWGWGATTK		 ChIP-seq
Mathelier et al.(2014)
MA0483.1 		0.783 0.870
Gfi1b
M08977_2.00 		Mus musculus
MAAYCACWGH
DCWGWGRTTK		 Misc
Kulakovskiy et al.(2013)
GFI1B_MOUSE.H11MO.0.A 		0.783 0.870
Gfi1b
M09514_2.00 		Mus musculus
MAATCWSWGC
GCWSWGATTK		 Misc
Heinz et al.(2010)
HPC7-Gfi1b_GSE22178 		0.783 0.870
GFI1B
M00239_2.00 		Homo sapiens
NNAAATCWSDN
NHSWGATTTNN		 PBM
Barrera et al.(2016)
GFI1B_A204T 		0.775 0.870
GFI1
M00238_2.00 		Homo sapiens
NWAWMNNNN
NNNNKWTWN		 PBM
Barrera et al.(2016)
GFI1_REF 		0.774 0.877
GFI1
M04507_2.00 		Homo sapiens
BMAATCACDGCNHBBCACTMN
NKAGTGVVDNGCHGTGATTKV		 SELEX
Yin et al.(2017)
GFI1_eDBD_HT-SELEX 		0.774 0.877
Gfi1
M02668_2.00 		Rattus norvegicus
NMAATCWVHS
SDBWGATTKN		 SELEX
Mathelier et al.(2014)
MA0038.1 		0.774 0.877
GFI1
M08905_2.00 		Homo sapiens
MAATCWSWGY
RCWSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1_HUMAN.H11MO.0.C 		0.774 0.877
Gfi1
M08984_2.00 		Mus musculus
MAATCWSWGY
RCWSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1_MOUSE.H11MO.0.C 		0.774 0.877
GFI1
M10235_2.00 		Homo sapiens
NNNNNNNRCHSWGATTTDNNBNNN
NNNVNNHAAATCWSDGYNNNNNNN		 Transfac
Matys et al.(2006)
V$GFI1_01 		0.774 0.877
GFI1
M10236_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1_Q6_01 		0.774 0.877
GFI1
M00236_2.00 		Homo sapiens
NAATMNNNN
NNNNKATTN		 PBM
Barrera et al.(2016)
GFI1_L400F 		0.774 0.877
GFI1
M04508_2.00 		Homo sapiens
NNAGTGVVNHGCWSTGATTKV
BMAATCASWGCDNBBCACTNN		 SELEX
Yin et al.(2017)
GFI1_eDBD_Methyl-HT-SELEX 		0.774 0.877
sens-2
M06165_2.00 		Drosophila melanogaster
RYAAATCWSDGCAYNC
GNRTGCHSWGATTTRY		 B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632 		0.756 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000016365 C2H2 ZF 162 185
ENSONIP00000016365 C2H2 ZF 191 213
ENSONIP00000016365 C2H2 ZF 219 241
ENSONIP00000016365 C2H2 ZF 247 269
ENSONIP00000016365 C2H2 ZF 275 297
ENSONIP00000016365 C2H2 ZF 303 326
ENSONIP00000016366 C2H2 ZF 1 24
ENSONIP00000016366 C2H2 ZF 30 52
ENSONIP00000016366 C2H2 ZF 58 80
ENSONIP00000016366 C2H2 ZF 86 108
ENSONIP00000016366 C2H2 ZF 114 136
ENSONIP00000016366 C2H2 ZF 142 165
ENSONIP00000016366 C2H2 ZF 202 225
ENSONIP00000016366 C2H2 ZF 231 253
ENSONIP00000016366 C2H2 ZF 259 281
ENSONIP00000016366 C2H2 ZF 287 309
ENSONIP00000016366 C2H2 ZF 316 338
ENSONIP00000016366 C2H2 ZF 344 367

Links

Other C2H2 ZF family TFs
Other Oreochromis niloticus TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013858 Ailuropoda melanoleuca ENSAMEG00000013858 I 0.774
Alligator_sinensis_CCG007476.1 Alligator sinensis Alligator_sinensis_CCG007476.1 I 0.772
ENSAPLG00000003373 Anas platyrhynchos ENSAPLG00000003373 I 0.784
ENSAPLG00000015700 Anas platyrhynchos ENSAPLG00000015700 I 0.772
GFI1 Anolis carolinensis ENSACAG00000004498 I 0.772
Afo_R001655 Aptenodytes forsteri Afo_R001655 I 0.784
Afo_R006147 Aptenodytes forsteri Afo_R006147 I 0.772
ENSAMXG00000004835 Astyanax mexicanus ENSAMXG00000004835 I 0.766
ENSBTAP00000016974-D1 Bos grunniens ENSBTAP00000016974-D1 I 0.775
ENSBTAP00000022231-D1 Bos grunniens ENSBTAP00000022231-D1 I 0.772
GFI1B Bos taurus ENSBTAG00000012772 I 0.775
GFI1 Bos taurus ENSBTAG00000016723 I 0.776
e_gw.11.853.1 Branchiostoma floridae e_gw.11.853.1 I 0.755
Brh_R002465 Buceros rhinoceros Brh_R002465 I 0.772
GFI1 Callithrix jacchus ENSCJAG00000017609 I 0.774
GFI1B Callithrix jacchus ENSCJAG00000018071 I 0.785
Aan_R000889 Calypte anna Aan_R000889 I 0.772
Aan_R008865 Calypte anna Aan_R008865 I 0.784
GFI1B Canis familiaris ENSCAFG00000019877 I 0.785
GFI1 Canis familiaris ENSCAFG00000020155 I 0.774
GFI1 Cavia porcellus ENSCPOG00000011727 I 0.774
GFI1B Cavia porcellus ENSCPOG00000026928 I 0.785
Cmyd_10004881 Chelonia mydas Cmyd_10004881 I 0.774
Cmyd_10017172 Chelonia mydas Cmyd_10017172 I 0.787
ENSCSAG00000015008 Chlorocebus sabaeus ENSCSAG00000015008 I 0.783
CGI_10011355 Crassostrea gigas CGI_10011355 I 0.763
gfi1aa Danio rerio ENSDARG00000020746 I 0.776
gfi1ab Danio rerio ENSDARG00000044457 I 0.776
gfi1b Danio rerio ENSDARG00000079947 I 0.808
GFI1 Dasypus novemcinctus ENSDNOG00000000782 I 0.774
GFI1B Dasypus novemcinctus ENSDNOG00000036528 I 0.785
Gfi1b Dipodomys ordii ENSDORG00000000342 I 0.775
GF15430 Drosophila ananassae FBgn0092455 I 0.756
GG10437 Drosophila erecta FBgn0102746 I 0.756
GH13715 Drosophila grimshawi FBgn0121191 I 0.756
sens-2 Drosophila melanogaster FBgn0051632 D 0.756
GI23984 Drosophila mojavensis FBgn0146708 I 0.756
GL26188 Drosophila persimilis FBgn0163770 I 0.756
GA16348 Drosophila pseudoobscura FBgn0076363 I 0.756
GM16223 Drosophila sechellia FBgn0171139 I 0.756
GJ21268 Drosophila virilis FBgn0208401 I 0.756
GK24242 Drosophila willistoni FBgn0226203 I 0.756
GE14143 Drosophila yakuba FBgn0231766 I 0.756
GFI1 Equus caballus ENSECAG00000006647 I 0.776
GFI1B Equus caballus ENSECAG00000008127 I 0.783
GFI1 Erinaceus europaeus ENSEEUG00000000198 I 0.774
GFI1 Felis catus ENSFCAG00000005914 I 0.774
GFI1B Felis catus ENSFCAG00000027147 I 0.787
ENSFALG00000001479 Ficedula albicollis ENSFALG00000001479 I 0.784
ENSGMOG00000007737 Gadus morhua ENSGMOG00000007737 I 0.772
ENSGMOG00000017295 Gadus morhua ENSGMOG00000017295 I 0.767
ENSGMOG00000019123 Gadus morhua ENSGMOG00000019123 I 0.812
GFI1B Gallus gallus ENSGALG00000003478 I 0.784
ENSGALG00000005940 Gallus gallus ENSGALG00000005940 I 0.772
gfi1ab Gasterosteus aculeatus ENSGACG00000004257 I 0.758
gfi1aa Gasterosteus aculeatus ENSGACG00000015674 I 0.776
gfi1b Gasterosteus aculeatus ENSGACG00000018134 I 0.817
Gfo_R007994 Geospiza fortis Gfo_R007994 I 0.784
Gfo_R010648 Geospiza fortis Gfo_R010648 I 0.772
GFI1 Gorilla gorilla ENSGGOG00000005320 I 0.774
GFI1B Gorilla gorilla ENSGGOG00000015828 I 0.785
GFI1 Homo sapiens ENSG00000162676 D 0.774
GFI1B Homo sapiens ENSG00000165702 D 0.785
ENSSTOG00000014583 Ictidomys tridecemlineatus ENSSTOG00000014583 I 0.774
ENSSTOG00000022285 Ictidomys tridecemlineatus ENSSTOG00000022285 I 0.780
ENSLACG00000012207 Latimeria chalumnae ENSLACG00000012207 I 0.792
ENSLACG00000013362 Latimeria chalumnae ENSLACG00000013362 I 0.776
ENSLOCG00000004711 Lepisosteus oculatus ENSLOCG00000004711 I 0.772
ENSLOCG00000005750 Lepisosteus oculatus ENSLOCG00000005750 I 0.814
GFI1 Loxodonta africana ENSLAFG00000018346 I 0.774
GFI1B Loxodonta africana ENSLAFG00000022367 I 0.780
ENSP00000361195 Macaca fascicularis ENSP00000361195 I 0.783
ENSP00000399719 Macaca fascicularis ENSP00000399719 I 0.770
ENSMMUG00000005068 Macaca mulatta ENSMMUG00000005068 I 0.774
GFI1B Macaca mulatta ENSMMUG00000005948 I 0.773
GFI1B Meleagris gallopavo ENSMGAG00000006129 I 0.784
GFI1 Meleagris gallopavo ENSMGAG00000008187 I 0.772
GFI1 Monodelphis domestica ENSMODG00000011802 I 0.774
GFI1B Monodelphis domestica ENSMODG00000012600 I 0.786
MDOA011065 Musca domestica MDOA011065 I 0.756
ENSMPUG00000004178 Mustela putorius furo ENSMPUG00000004178 I 0.774
ENSMPUG00000012489 Mustela putorius furo ENSMPUG00000012489 I 0.785
Gfi1b Mus musculus ENSMUSG00000026815 D 0.783
Gfi1 Mus musculus ENSMUSG00000029275 D 0.774
Myotis_brandtii_GFI1B_10010118 Myotis brandtii Myotis_brandtii_GFI1B_10010118 I 0.760
GFI1B Myotis lucifugus ENSMLUG00000006673 I 0.770
GFI1 Myotis lucifugus ENSMLUG00000015191 I 0.776
ENSNLEG00000010470 Nomascus leucogenys ENSNLEG00000010470 I 0.774
ENSNLEG00000012963 Nomascus leucogenys ENSNLEG00000012963 I 0.785
GFI1 Ochotona princeps ENSOPRG00000001473 I 0.774
Ogr09401 Ophisaurus gracilis Ogr09401 I 0.772
ENSONIG00000010573 Oreochromis niloticus ENSONIG00000010573 I 0.769
ENSONIG00000019246 Oreochromis niloticus ENSONIG00000019246 I 0.774
GFI1B Ornithorhynchus anatinus ENSOANG00000014723 I 0.794
GFI1B Oryctolagus cuniculus ENSOCUG00000001793 I 0.785
gfi1aa Oryzias latipes ENSORLG00000005060 I 0.769
gfi1b Oryzias latipes ENSORLG00000014390 I 0.825
GFI1B Otolemur garnettii ENSOGAG00000008879 I 0.779
GFI1 Otolemur garnettii ENSOGAG00000027913 I 0.774
GFI1B Pan troglodytes ENSPTRG00000021505 I 0.785
ENSPANG00000016433 Papio anubis ENSPANG00000016433 I 0.774
ENSPANG00000024216 Papio anubis ENSPANG00000024216 I 0.783
ENSPSIG00000008734 Pelodiscus sinensis ENSPSIG00000008734 I 0.772
ENSPSIG00000012112 Pelodiscus sinensis ENSPSIG00000012112 I 0.790
ENSPFOG00000003460 Poecilia formosa ENSPFOG00000003460 I 0.817
ENSPFOG00000017327 Poecilia formosa ENSPFOG00000017327 I 0.769
ENSPFOG00000023214 Poecilia formosa ENSPFOG00000023214 I 0.774
Pvit_00259 Pogona vitticeps Pvit_00259 I 0.772
ENSPPYG00000019718 Pongo abelii ENSPPYG00000019718 I 0.785
GFI1B Procavia capensis ENSPCAG00000012329 I 0.785
GFI1 Pteropus vampyrus ENSPVAG00000006928 I 0.776
Gfi1 Rattus norvegicus ENSRNOG00000002042 D 0.774
Gfi1b Rattus norvegicus ENSRNOG00000011353 I 0.785
SPU_012645 Strongylocentrotus purpuratus SPU_012645 I 0.777
GFI1B Sus scrofa ENSSSCG00000005737 I 0.787
GFI1 Sus scrofa ENSSSCG00000006902 I 0.776
GFI1 Taeniopygia guttata ENSTGUG00000006060 I 0.772
gfi1ab Takifugu rubripes ENSTRUG00000000415 I 0.766
gfi1b Takifugu rubripes ENSTRUG00000004525 I 0.825
gfi1aa Takifugu rubripes ENSTRUG00000004744 I 0.765
tetur16g01570 Tetranychus urticae tetur16g01570 I 0.757
gfi1ab Tetraodon nigroviridis ENSTNIG00000000651 I 0.764
gfi1b Tetraodon nigroviridis ENSTNIG00000003834 I 0.825
GFI1 Tursiops truncatus ENSTTRG00000000082 I 0.776
Tal_R001363 Tyto alba Tal_R001363 I 0.785
Tal_R006464 Tyto alba Tal_R006464 I 0.772
gfi1b.L Xenopus laevis XB-GENE-944429 I 0.799
gfi1b Xenopus tropicalis XB-GENE-944426 I 0.799
gfi1 Xenopus tropicalis XB-GENE-960553 I 0.772
ENSXMAG00000009274 Xiphophorus maculatus ENSXMAG00000009274 I 0.769