GFI1 (Ochotona princeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOPRG00000001473 T104389_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GFI1
M00238_2.00 		Homo sapiens
NWAWMNNNN
NNNNKWTWN		 PBM
Barrera et al.(2016)
GFI1_REF 		0.827 1.000
GFI1
M04507_2.00 		Homo sapiens
BMAATCACDGCNHBBCACTMN
NKAGTGVVDNGCHGTGATTKV		 SELEX
Yin et al.(2017)
GFI1_eDBD_HT-SELEX 		0.827 1.000
Gfi1
M02668_2.00 		Rattus norvegicus
NMAATCWVHS
SDBWGATTKN		 SELEX
Mathelier et al.(2014)
MA0038.1 		0.827 1.000
GFI1
M08905_2.00 		Homo sapiens
MAATCWSWGY
RCWSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1_HUMAN.H11MO.0.C 		0.827 1.000
Gfi1
M08984_2.00 		Mus musculus
MAATCWSWGY
RCWSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1_MOUSE.H11MO.0.C 		0.827 1.000
GFI1
M10235_2.00 		Homo sapiens
NNNNNNNRCHSWGATTTDNNBNNN
NNNVNNHAAATCWSDGYNNNNNNN		 Transfac
Matys et al.(2006)
V$GFI1_01 		0.827 1.000
GFI1
M10236_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1_Q6_01 		0.827 1.000
GFI1
M04508_2.00 		Homo sapiens
NNAGTGVVNHGCWSTGATTKV
BMAATCASWGCDNBBCACTNN		 SELEX
Yin et al.(2017)
GFI1_eDBD_Methyl-HT-SELEX 		0.827 1.000
GFI1
M00236_2.00 		Homo sapiens
NAATMNNNN
NNNNKATTN		 PBM
Barrera et al.(2016)
GFI1_L400F 		0.825 0.993
GFI1
M00237_2.00 		Homo sapiens
ATATCAVD
HBTGATAT		 PBM
Barrera et al.(2016)
GFI1_N382S 		0.790 0.993
GFI1B
M00240_2.00 		Homo sapiens
NNAAATCWSDN
NHSWGATTTNN		 PBM
Barrera et al.(2016)
GFI1B_REF 		0.781 0.877
GFI1B
M04523_2.00 		Homo sapiens
NMAATCASDGCNNBBCACTNN
NNAGTGVVNNGCHSTGATTKN		 SELEX
Yin et al.(2017)
GFI1B_eDBD_HT-SELEX 		0.781 0.877
Gfi1b
M08098_2.00 		Mus musculus
MAATCWCWGCH
DGCWGWGATTK		 ChIP-seq
Mathelier et al.(2014)
MA0483.1 		0.781 0.877
GFI1B
M08909_2.00 		Homo sapiens
MAATCWSDGY
RCHSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1B_HUMAN.H11MO.0.A 		0.781 0.877
Gfi1b
M08977_2.00 		Mus musculus
MAAYCACWGH
DCWGWGRTTK		 Misc
Kulakovskiy et al.(2013)
GFI1B_MOUSE.H11MO.0.A 		0.781 0.877
Gfi1b
M09514_2.00 		Mus musculus
MAATCWSWGC
GCWSWGATTK		 Misc
Heinz et al.(2010)
HPC7-Gfi1b_GSE22178 		0.781 0.877
GFI1B
M10243_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1B_01 		0.781 0.877
GFI1B
M10244_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1B_Q6 		0.781 0.877
GFI1B
M04524_2.00 		Homo sapiens
NMAATCASWGCDNNBCACTHN
NDAGTGVNNHGCWSTGATTKN		 SELEX
Yin et al.(2017)
GFI1B_eDBD_Methyl-HT-SELEX 		0.781 0.877
sens-2
M06165_2.00 		Drosophila melanogaster
RYAAATCWSDGCAYNC
GNRTGCHSWGATTTRY		 B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632 		0.774 0.848
GFI1B
M00239_2.00 		Homo sapiens
NNAAATCWSDN
NHSWGATTTNN		 PBM
Barrera et al.(2016)
GFI1B_A204T 		0.771 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000001344 C2H2 ZF 255 278
ENSOPRP00000001344 C2H2 ZF 284 306
ENSOPRP00000001344 C2H2 ZF 312 334
ENSOPRP00000001344 C2H2 ZF 340 362
ENSOPRP00000001344 C2H2 ZF 368 390
ENSOPRP00000001344 C2H2 ZF 396 419

Links

Other C2H2 ZF family TFs
Other Ochotona princeps TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001448 Acyrthosiphon pisum ACYPI001448 I
AAEL002902 Aedes aegypti AAEL002902 I
ENSAMEG00000008556 Ailuropoda melanoleuca ENSAMEG00000008556 I
ENSAMEG00000020165 Ailuropoda melanoleuca ENSAMEG00000020165 I
Alligator_sinensis_CCG002585.1 Alligator sinensis Alligator_sinensis_CCG002585.1 I
Alligator_sinensis_CCG005115.1 Alligator sinensis Alligator_sinensis_CCG005115.1 I
Alligator_sinensis_CCG008488.1 Alligator sinensis Alligator_sinensis_CCG008488.1 I
ENSAPLG00000000878 Anas platyrhynchos ENSAPLG00000000878 I
ENSAPLG00000007177 Anas platyrhynchos ENSAPLG00000007177 I
ENSACAG00000009715 Anolis carolinensis ENSACAG00000009715 I
twist1 Anolis carolinensis ENSACAG00000011825 I
ENSACAG00000015086 Anolis carolinensis ENSACAG00000015086 I
AALB010655 Anopheles albimanus AALB010655 I
AARA000771 Anopheles arabiensis AARA000771 I
AATE005140 Anopheles atroparvus AATE005140 I
ACHR006076 Anopheles christyi ACHR006076 I
ACOM023427 Anopheles coluzzii ACOM023427 I
ACUA022223 Anopheles culicifacies ACUA022223 I
ADIR004364 Anopheles dirus ADIR004364 I
AEPI000695 Anopheles epiroticus AEPI000695 I
AFAF020800 Anopheles farauti AFAF020800 I
AFUN009694 Anopheles funestus AFUN009694 I
AGAP011985 Anopheles gambiae AGAP011985 I
AMEC000330 Anopheles melas AMEC000330 I
AMEM016167 Anopheles merus AMEM016167 I
AMIN004405 Anopheles minimus AMIN004405 I
AQUA008654 Anopheles quadriannulatus AQUA008654 I
ASTEI05879 Anopheles stephensi ASTEI05879 I
GB40416 Apis mellifera GB40416 I
Afo_R010658 Aptenodytes forsteri Afo_R010658 I
Afo_R013292 Aptenodytes forsteri Afo_R013292 I
ENSAMXG00000024993 Astyanax mexicanus ENSAMXG00000024993 I
ENSAMXG00000025039 Astyanax mexicanus ENSAMXG00000025039 I
ENSAMXG00000025095 Astyanax mexicanus ENSAMXG00000025095 I
ENSAMXG00000025610 Astyanax mexicanus ENSAMXG00000025610 I
ENSAMXG00000025657 Astyanax mexicanus ENSAMXG00000025657 I
ACEP23430 Atta cephalotes ACEP23430 I
BGLB003400 Biomphalaria glabrata BGLB003400 I
BGLB010605 Biomphalaria glabrata BGLB010605 I
BGIBMGA008990 Bombyx mori BGIBMGA008990 I
ENSP00000405176-D1 Bos grunniens ENSP00000405176-D1 I
TWIST2 Bos taurus ENSBTAG00000021444 I
TWIST1 Bos taurus ENSBTAG00000046922 I
estExt_gwp.C_4170045 Branchiostoma floridae estExt_gwp.C_4170045 I
fgenesh2_pm.scaffold_217000008 Branchiostoma floridae fgenesh2_pm.scaffold_217000008 I
Brh_R012765 Buceros rhinoceros Brh_R012765 I
TWIST2 Callithrix jacchus ENSCJAG00000023006 I
Aan_R001044 Calypte anna Aan_R001044 I
Aan_R002857 Calypte anna Aan_R002857 I
Cflo_04586--NP_001011637.1_APIME Camponotus floridanus Cflo_04586--NP_001011637.1_APIME I
TWIST2 Canis familiaris ENSCAFG00000012469 I
CapteG111042 Capitella teleta CapteG111042 I
CapteG154829 Capitella teleta CapteG154829 I
TWIST2 Cavia porcellus ENSCPOG00000025980 I
Cmyd_10002489 Chelonia mydas Cmyd_10002489 I
Cmyd_10006750 Chelonia mydas Cmyd_10006750 I
ENSCSAG00000018801 Chlorocebus sabaeus ENSCSAG00000018801 I
ENSCSAG00000019610 Chlorocebus sabaeus ENSCSAG00000019610 I
CLEC011700 Cimex lectularius CLEC011700 I
csin110283 Clonorchis sinensis csin110283 I
CGI_10006631 Crassostrea gigas CGI_10006631 I
CGI_10013641 Crassostrea gigas CGI_10013641 I
CpipJ_CPIJ012827 Culex pipiens CpipJ_CPIJ012827 I
CpipJ_CPIJ012828 Culex pipiens CpipJ_CPIJ012828 I
CPIJ012827 Culex quinquefasciatus CPIJ012827 I
CPIJ012828 Culex quinquefasciatus CPIJ012828 I
KGM_08280 Danaus plexippus KGM_08280 I
twist3 Danio rerio ENSDARG00000019646 I
twist1a Danio rerio ENSDARG00000030402 I
twist1b Danio rerio ENSDARG00000076010 I
twist2 Danio rerio ENSDARG00000078266 I
DAPPUDRAFT_320202 Daphnia pulex DAPPUDRAFT_320202 I
TWIST2 Dasypus novemcinctus ENSDNOG00000002434 I
TWIST1 Dasypus novemcinctus ENSDNOG00000037354 I
YQE_04855 Dendroctonus ponderosae YQE_04855 I
DILT_0001206901 Diphyllobothrium latum DILT_0001206901 I
Twist2 Dipodomys ordii ENSDORG00000005906 I
ENSDORG00000012866 Dipodomys ordii ENSDORG00000012866 I
GF13559 Drosophila ananassae FBgn0090588 I
twi Drosophila erecta FBgn0064598 I
GH20971 Drosophila grimshawi FBgn0128433 I
twi Drosophila melanogaster FBgn0003900 D
GI21307 Drosophila mojavensis FBgn0144037 I
GL11229 Drosophila persimilis FBgn0148838 I
twi Drosophila pseudoobscura FBgn0243556 I
GM15978 Drosophila sechellia FBgn0170894 I
twi Drosophila simulans FBgn0016355 I
twi Drosophila virilis FBgn0020065 I
GK19547 Drosophila willistoni FBgn0221545 I
twi Drosophila yakuba FBgn0084444 I
ECANG7_02703 Echinococcus canadensis ECANG7_02703 I
EmuJ_000663800 Echinococcus multilocularis EmuJ_000663800 I
TWIST2 Echinops telfairi ENSETEG00000009809 I
ENSETEG00000013115 Echinops telfairi ENSETEG00000013115 I
ECPE_0000551801 Echinostoma caproni ECPE_0000551801 I
TWIST1 Erinaceus europaeus ENSEEUG00000015333 I
ENSFALG00000009781 Ficedula albicollis ENSFALG00000009781 I
ENSFALG00000014990 Ficedula albicollis ENSFALG00000014990 I
ENSFALG00000015081 Ficedula albicollis ENSFALG00000015081 I
ENSGMOG00000002790 Gadus morhua ENSGMOG00000002790 I
ENSGMOG00000003155 Gadus morhua ENSGMOG00000003155 I
ENSGALG00000004274 Gallus gallus ENSGALG00000004274 I
ENSGALG00000006321 Gallus gallus ENSGALG00000006321 I
ENSGALG00000026059 Gallus gallus ENSGALG00000026059 I
twist2 Gasterosteus aculeatus ENSGACG00000002227 I
twist3b Gasterosteus aculeatus ENSGACG00000004773 I
TWIST1 Gasterosteus aculeatus ENSGACG00000006420 I
twist3 Gasterosteus aculeatus ENSGACG00000007963 I
twist1b Gasterosteus aculeatus ENSGACG00000008070 I
Gfo_R002785 Geospiza fortis Gfo_R002785 I
Gfo_R012065 Geospiza fortis Gfo_R012065 I
Gfo_R014393 Geospiza fortis Gfo_R014393 I
ENSGGOG00000026506 Gorilla gorilla ENSGGOG00000026506 I
Hsal_01530--NP_001011637.1_APIME Harpegnathos saltator Hsal_01530--NP_001011637.1_APIME I
HMEL011603 Heliconius melpomene HMEL011603 I
HelroG155122 Helobdella robusta HelroG155122 I
TWIST1 Homo sapiens ENSG00000122691 D
TWIST2 Homo sapiens ENSG00000233608 I
HDID_0001003601 Hymenolepis diminuta HDID_0001003601 I
HmN_000912800 Hymenolepis microstoma HmN_000912800 I
HNAJ_0000179601 Hymenolepis nana HNAJ_0000179601 I
ENSSTOG00000004633 Ictidomys tridecemlineatus ENSSTOG00000004633 I
ISCW009433 Ixodes scapularis ISCW009433 I
ENSLACG00000012096 Latimeria chalumnae ENSLACG00000012096 I
ENSLACG00000013366 Latimeria chalumnae ENSLACG00000013366 I
ENSLACG00000019113 Latimeria chalumnae ENSLACG00000019113 I
ENSLOCG00000017835 Lepisosteus oculatus ENSLOCG00000017835 I
ENSLOCG00000018198 Lepisosteus oculatus ENSLOCG00000018198 I
ENSLOCG00000018350 Lepisosteus oculatus ENSLOCG00000018350 I
LDEC006528 Leptinotarsa decemlineata LDEC006528 I
LotgiG179182 Lottia gigantea LotgiG179182 I
TWIST2 Loxodonta africana ENSLAFG00000032174 I
LCUP006189 Lucilia cuprina LCUP006189 I
LLOJ002131 Lutzomyia longipalpis LLOJ002131 I
ENSMMUP00000014629 Macaca fascicularis ENSMMUP00000014629 I
TWIST1 Macaca mulatta ENSMMUG00000011173 I
TWIST2 Macaca mulatta ENSMMUG00000021909 I
ENSMEUG00000013853 Macropus eugenii ENSMEUG00000013853 I
ENSMGAG00000002218 Meleagris gallopavo ENSMGAG00000002218 I
TWIST1 Meleagris gallopavo ENSMGAG00000009311 I
MCOS_0000111401 Mesocestoides corti MCOS_0000111401 I
ENSMODG00000001412 Monodelphis domestica ENSMODG00000001412 I
TWIST1 Monodelphis domestica ENSMODG00000023924 I
MDOA005417 Musca domestica MDOA005417 I
ENSMPUG00000019429 Mustela putorius furo ENSMPUG00000019429 I
Twist2 Mus musculus ENSMUSG00000007805 D
Twist1 Mus musculus ENSMUSG00000035799 D
Myotis_brandtii_Twist1_10031742 Myotis brandtii Myotis_brandtii_Twist1_10031742 I
TWIST1 Myotis lucifugus ENSMLUG00000007047 I
TWIST2 Myotis lucifugus ENSMLUG00000023316 I
NV10141 Nasonia vitripennis NV10141 I
NEMVEDRAFT_v1g234699 Nematostella vectensis NEMVEDRAFT_v1g234699 I
ENSNLEG00000011342 Nomascus leucogenys ENSNLEG00000011342 I
ENSNLEG00000019264 Nomascus leucogenys ENSNLEG00000019264 I
TWIST2 Ochotona princeps ENSOPRG00000017069 I
Ocbimv22015922m.g Octopus bimaculoides Ocbimv22015922m.g I
Ogr01719 Ophisaurus gracilis Ogr01719 I
Ogr06591 Ophisaurus gracilis Ogr06591 I
Ogr11552 Ophisaurus gracilis Ogr11552 I
Ogr11553 Ophisaurus gracilis Ogr11553 I
ENSONIG00000020502 Oreochromis niloticus ENSONIG00000020502 I
ENSONIG00000020610 Oreochromis niloticus ENSONIG00000020610 I
ENSONIG00000021177 Oreochromis niloticus ENSONIG00000021177 I
ENSONIG00000021342 Oreochromis niloticus ENSONIG00000021342 I
ENSONIG00000021420 Oreochromis niloticus ENSONIG00000021420 I
TWIST1 Ornithorhynchus anatinus ENSOANG00000009614 I
TWIST2 Oryctolagus cuniculus ENSOCUG00000004073 I
TWIST1 Oryzias latipes ENSORLG00000004012 I
twist1 Oryzias latipes ENSORLG00000007251 I
twist3 Oryzias latipes ENSORLG00000016373 I
twist2 Oryzias latipes ENSORLG00000018096 I
TWIST2 Otolemur garnettii ENSOGAG00000029007 I
ENSOARG00000000265 Ovis aries ENSOARG00000000265 I
ENSOARG00000009754 Ovis aries ENSOARG00000009754 I
ENSPTRG00000018960 Pan troglodytes ENSPTRG00000018960 I
TWIST2 Pan troglodytes ENSPTRG00000033910 I
ENSPANG00000001578 Papio anubis ENSPANG00000001578 I
PHUM396880 Pediculus humanus PHUM396880 I
ENSPSIG00000001961 Pelodiscus sinensis ENSPSIG00000001961 I
ENSPSIG00000012843 Pelodiscus sinensis ENSPSIG00000012843 I
ENSPMAG00000003993 Petromyzon marinus ENSPMAG00000003993 I
ENSPMAG00000010126 Petromyzon marinus ENSPMAG00000010126 I
PPAI002101 Phlebotomus papatasi PPAI002101 I
ENSPFOG00000019887 Poecilia formosa ENSPFOG00000019887 I
ENSPFOG00000020053 Poecilia formosa ENSPFOG00000020053 I
ENSPFOG00000020314 Poecilia formosa ENSPFOG00000020314 I
ENSPFOG00000020501 Poecilia formosa ENSPFOG00000020501 I
Pvit_02271 Pogona vitticeps Pvit_02271 I
Pvit_05844 Pogona vitticeps Pvit_05844 I
ENSPPYG00000017754 Pongo abelii ENSPPYG00000017754 I
TWIST1 Pteropus vampyrus ENSPVAG00000001710 I
Twist1 Rattus norvegicus ENSRNOG00000011101 I
Twist2 Rattus norvegicus ENSRNOG00000020355 I
RPRC000323 Rhodnius prolixus RPRC000323 I
nRc.2.0.1.g46228 Romanomermis culicivorax nRc.2.0.1.g46228 I
Sakowv30001350m.g Saccoglossus kowalevskii Sakowv30001350m.g I
ENSSHAG00000003328 Sarcophilus harrisii ENSSHAG00000003328 I
SSLN_0000059301 Schistocephalus solidus SSLN_0000059301 I
A_07561 Schistosoma haematobium A_07561 I
Sjc_0042560 Schistosoma japonicum Sjc_0042560 I
Smp_203270 Schistosoma mansoni Smp_203270 I
SMU15037660 Schmidtea mediterranea SMU15037660 I
SINV20920 Solenopsis invicta SINV20920 I
SPU_030059 Strongylocentrotus purpuratus SPU_030059 I
TWIST1 Sus scrofa ENSSSCG00000015370 I
TWIST2 Sus scrofa ENSSSCG00000016343 I
TASK_0000180901 Taenia asiatica TASK_0000180901 I
TsM_000716700 Taenia solium TsM_000716700 I
TWIST1 Taeniopygia guttata ENSTGUG00000002643 I
ENSTGUG00000003194 Taeniopygia guttata ENSTGUG00000003194 I
ENSTGUG00000003756 Taeniopygia guttata ENSTGUG00000003756 I
twist2 Takifugu rubripes ENSTRUG00000006090 I
twist3 Takifugu rubripes ENSTRUG00000011374 I
twist3 Takifugu rubripes ENSTRUG00000012607 I
twist1 Takifugu rubripes ENSTRUG00000015797 I
tetur03g03150 Tetranychus urticae tetur03g03150 I
twist3 Tetraodon nigroviridis ENSTNIG00000000441 I
twist2 Tetraodon nigroviridis ENSTNIG00000001562 I
TWIST1 Tetraodon nigroviridis ENSTNIG00000001678 I
twist1b Tetraodon nigroviridis ENSTNIG00000018440 I
TC014598 Tribolium castaneum TC014598 I
D917_00468 Trichinella nativa D917_00468 I
EFV58362 Trichinella spiralis EFV58362 I
TMUE_s0004013100 Trichuris muris TMUE_s0004013100 I
D918_07072 Trichuris suis D918_07072 I
TTRE_0000397101 Trichuris trichiura TTRE_0000397101 I
twist1.L Xenopus laevis XB-GENE-6255840 I
twist1.S Xenopus laevis XB-GENE-865309 I
twist1 Xenopus tropicalis XB-GENE-479802 I
twist2 Xenopus tropicalis XB-GENE-5878700 I
ENSXMAG00000019787 Xiphophorus maculatus ENSXMAG00000019787 I
ENSXMAG00000019956 Xiphophorus maculatus ENSXMAG00000019956 I
ENSXMAG00000019999 Xiphophorus maculatus ENSXMAG00000019999 I
ENSXMAG00000020062 Xiphophorus maculatus ENSXMAG00000020062 I
ENSXMAG00000020142 Xiphophorus maculatus ENSXMAG00000020142 I
L798_05856 Zootermopsis nevadensis L798_05856 I