CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000010732
(
Pongo abelii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPPYG00000010732
T107078_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OVOL2
M00235_2.00
Homo sapiens
NCCGYTANNN
NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_REF
0.827
1.000
OVOL2
M04445_2.00
Homo sapiens
NNHCCGYTANNHN
NDNNTARCGGDNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX
0.827
1.000
OVOL2
M04447_2.00
Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX
0.827
1.000
OVOL2
M10207_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOVOB_01
0.827
1.000
OVOL2
M04446_2.00
Homo sapiens
NNWCCGTTANNHN
NDNNTAACGGWNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX
0.827
1.000
OVOL2
M04448_2.00
Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX
0.827
1.000
Ovol2
M08993_2.00
Mus musculus
HCCGTTAN
NTAACGGD
Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C
0.813
0.967
OVOL2
M00234_2.00
Homo sapiens
NCCGYTANNN
NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_D228E
0.772
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000011997
C2H2 ZF
119
141
HSCDLCGKGFRLQRMLNRHLKCH
ENSPPYP00000011997
C2H2 ZF
147
169
HLCTFCGKGFNDTFDLKRHVRTH
ENSPPYP00000011997
C2H2 ZF
175
198
YKCNVCNKAFTQRCSLESHLKKIH
ENSPPYP00000011997
C2H2 ZF
214
237
YVCEDCGYTGPTQEDLYLHVNSAH
ENSPPYP00000024504
C2H2 ZF
133
155
HSCDLCGKGFRLQRMLNRHLKCH
ENSPPYP00000024504
C2H2 ZF
161
183
HLCTFCGKGFNDTFDLKRHVRTH
ENSPPYP00000024504
C2H2 ZF
189
212
YKCNVCNKAFTQRCSLESHLKKIH
ENSPPYP00000024504
C2H2 ZF
228
251
YVCEDCGYTGPTQEDLYLHVNSAH
Links
Other
C2H2 ZF
family TFs
Other
Pongo abelii
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Aa02201
Panicum virgatum
Pavir.Aa02201
N
0.000
Si016765m.g
Setaria italica
Si016765m.g
N
0.000
Sb04g011230
Sorghum bicolor
Sb04g011230
N
0.000
GRMZM2G125239
Zea mays
GRMZM2G125239
N
0.000