ZNF140 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000023960 T108306_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF140
M04621_2.00 		Homo sapiens
DRCAATTCCGCTCN
NGAGCGGAATTGYH		 SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX 		0.825 0.996
ZNF140
M08372_2.00 		Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB
VNNNNNNNNNNNDGRGCRGAATTG		 ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE 		0.825 0.996
ZNF140
M08945_2.00 		Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN
NDGGAGYRGAATTGCWRVRNHNNN		 Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C 		0.825 0.996
ZNF140
M04622_2.00 		Homo sapiens
NRCAATTCCGCTCV
BGAGCGGAATTGYN		 SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX 		0.825 0.996
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000040479 C2H2 ZF 161 183
ENSPTRP00000040479 C2H2 ZF 189 211
ENSPTRP00000040479 C2H2 ZF 217 239
ENSPTRP00000040479 C2H2 ZF 245 267
ENSPTRP00000040479 C2H2 ZF 273 295
ENSPTRP00000040479 C2H2 ZF 301 323
ENSPTRP00000040479 C2H2 ZF 329 351
ENSPTRP00000040479 C2H2 ZF 357 379
ENSPTRP00000040479 C2H2 ZF 385 407
ENSPTRP00000040479 C2H2 ZF 413 435

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF521 Anolis carolinensis ENSACAG00000001799 I
Afo_R005912 Aptenodytes forsteri Afo_R005912 I
ENSBTAP00000045301-D1 Bos grunniens ENSBTAP00000045301-D1 I
ZNF521 Bos taurus ENSBTAG00000007383 I
ZNF521 Callithrix jacchus ENSCJAG00000020691 I
ZNF521 Cavia porcellus ENSCPOG00000015173 I
ENSCSAG00000017805 Chlorocebus sabaeus ENSCSAG00000017805 I
ZNF521 Dasypus novemcinctus ENSDNOG00000040834 I
ZNF521 Erinaceus europaeus ENSEEUG00000006860 I
ENSFALG00000006065 Ficedula albicollis ENSFALG00000006065 I
Gfo_R012611 Geospiza fortis Gfo_R012611 I
ZNF521 Gorilla gorilla ENSGGOG00000027325 I
ZNF521 Homo sapiens ENSG00000198795 D
ENSSTOG00000012398 Ictidomys tridecemlineatus ENSSTOG00000012398 I
ZNF521 Loxodonta africana ENSLAFG00000013445 I
ENSMMUP00000028000 Macaca fascicularis ENSMMUP00000028000 I
ZNF521 Macaca mulatta ENSMMUG00000008600 I
ZNF521 Microcebus murinus ENSMICG00000006267 I
ZNF521 Monodelphis domestica ENSMODG00000021509 I
Zfp521 Mus musculus ENSMUSG00000024420 I
ENSNLEG00000006568 Nomascus leucogenys ENSNLEG00000006568 I
ZNF521 Oryctolagus cuniculus ENSOCUG00000005774 I
ZNF521 Otolemur garnettii ENSOGAG00000007195 I
ZNF521 Pan troglodytes ENSPTRG00000022783 I
ENSPSIG00000002538 Pelodiscus sinensis ENSPSIG00000002538 I
ENSPPYG00000009074 Pongo abelii ENSPPYG00000009074 I
Zfp521 Rattus norvegicus ENSRNOG00000016874 I
ENSTSYG00000005246 Tarsius syrichta ENSTSYG00000005246 I
ZNF521 Tursiops truncatus ENSTTRG00000005318 I