CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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E4f1
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000009224
T108948_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E4f1
M10339_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PHIAP3_03
0.826
0.990
E4F1
M10255_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E4F1_Q6_01
0.816
0.961
E4F1
M10256_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E4F1_Q6
0.816
0.961
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000012506
C2H2 ZF
193
215
YVCMLCHKTFKTGSILKAHMVTH
ENSRNOP00000012506
C2H2 ZF
221
243
HECKLCGASFRTKGSLIRHHRRH
ENSRNOP00000012506
C2H2 ZF
249
270
YKCAKCGKSFRESGALTRHLKS
ENSRNOP00000012506
C2H2 ZF
434
456
HPCSQCSETFPSAATLEAHKRGH
ENSRNOP00000012506
C2H2 ZF
462
484
FTCTQCGKAFPKAYLLKKHQEVH
ENSRNOP00000012506
C2H2 ZF
490
512
FRCGDCGKLYKTIAHVRGHRRVH
ENSRNOP00000012506
C2H2 ZF
518
540
FPCPQCGKRYKTKNAQQVHFRTH
ENSRNOP00000012506
C2H2 ZF
546
568
HVCQFCSRGFREKGSLVRHVRHH
ENSRNOP00000012506
C2H2 ZF
574
595
FKCYKCGRGFAEHGTLNRHLRT
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10022679
Crassostrea gigas
CGI_10022679
N
ENSPMAG00000001124
Petromyzon marinus
ENSPMAG00000001124
N
MYT1L
Pteropus vampyrus
ENSPVAG00000001625
N
tetur15g00740
Tetranychus urticae
tetur15g00740
N