CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Rreb1
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000015701
T109020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RREB1
M02665_2.00
Homo sapiens
MCMCMAMMCAMCMMCHMMSV
BSKKDGKKGKTGKKTKGKGK
SELEX
Mathelier et al.(2014)
MA0073.1
0.823
0.989
RREB1
M10203_2.00
Homo sapiens
MCCCAAMCMMMCMM
KKGKKKGKTTGGGK
Transfac
Matys et al.(2006)
V$RREB1_01
0.823
0.989
RREB1
M10204_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RREB1_Q5
0.823
0.989
RREB1
M10205_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RREB_Q5
0.823
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000056967
C2H2 ZF
66
88
YNCPLCEKVCTTQHQLTMHIRQH
ENSRNOP00000056967
C2H2 ZF
97
119
HSCSICGKSLSSASSLDRHMLVH
ENSRNOP00000056967
C2H2 ZF
125
147
YKCTVCGQSFTTNGNMHRHMKIH
ENSRNOP00000056967
C2H2 ZF
643
665
YPCRFCNQVFAFSGVLRAHVRSH
ENSRNOP00000056967
C2H2 ZF
671
693
YQCNICDYIAADKAALIRHLRTH
ENSRNOP00000056967
C2H2 ZF
699
722
YICKICHYPFTVKANCERHLRKKH
ENSRNOP00000056967
C2H2 ZF
753
775
TVCRLCGEDLKHYRALRIHMRTH
ENSRNOP00000056967
C2H2 ZF
790
813
FECKECNAAFAAKRNCIHHILKQH
ENSRNOP00000056967
C2H2 ZF
1517
1539
KVCSVCNKRFWSLQDLTRHMRSH
ENSRNOP00000056967
C2H2 ZF
1545
1567
YKCQTCERTFTLKHSLVRHQRIH
ENSRNOP00000073072
C2H2 ZF
66
88
YNCPLCEKVCTTQHQLTMHIRQH
ENSRNOP00000073072
C2H2 ZF
97
119
HSCSICGKSLSSASSLDRHMLVH
ENSRNOP00000073072
C2H2 ZF
125
147
YKCTVCGQSFTTNGNMHRHMKIH
ENSRNOP00000073072
C2H2 ZF
643
665
YPCRFCNQVFAFSGVLRAHVRSH
ENSRNOP00000073072
C2H2 ZF
671
693
YQCNICDYIAADKAALIRHLRTH
ENSRNOP00000073072
C2H2 ZF
699
722
YICKICHYPFTVKANCERHLRKKH
ENSRNOP00000073072
C2H2 ZF
753
775
TVCRLCGEDLKHYRALRIHMRTH
ENSRNOP00000073072
C2H2 ZF
790
813
FECKECNAAFAAKRNCIHHILKQH
ENSRNOP00000073072
C2H2 ZF
1248
1270
INCPHCPRVFPWASSLQRHMLTH
ENSRNOP00000073072
C2H2 ZF
1276
1299
FPCQKCDAFFSTKSNCERHQLRKH
ENSRNOP00000073072
C2H2 ZF
1571
1593
KVCSVCNKRFWSLQDLTRHMRSH
ENSRNOP00000073072
C2H2 ZF
1599
1621
YKCQTCERTFTLKHSLVRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy