Rreb1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000015701 T109020_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including positive regulation of cell migration; regulation of cell morphogenesis; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of transcription, DNA-templated. Predicted to be located in fibrillar center and nuclear speck. Predicted to be active in nucleus. Orthologous to human RREB1 (ras responsive element binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RREB1
M02665_2.00 		Homo sapiens
MCMCMAMMCAMCMMCHMMSV
BSKKDGKKGKTGKKTKGKGK		 SELEX
Mathelier et al.(2014)
MA0073.1 		0.823 0.989
RREB1
M10203_2.00 		Homo sapiens
MCCCAAMCMMMCMM
KKGKKKGKTTGGGK		 Transfac
Matys et al.(2006)
V$RREB1_01 		0.823 0.989
RREB1
M10204_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RREB1_Q5 		0.823 0.989
RREB1
M10205_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RREB_Q5 		0.823 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000056967 C2H2 ZF 66 88
ENSRNOP00000056967 C2H2 ZF 97 119
ENSRNOP00000056967 C2H2 ZF 125 147
ENSRNOP00000056967 C2H2 ZF 643 665
ENSRNOP00000056967 C2H2 ZF 671 693
ENSRNOP00000056967 C2H2 ZF 699 722
ENSRNOP00000056967 C2H2 ZF 753 775
ENSRNOP00000056967 C2H2 ZF 790 813
ENSRNOP00000056967 C2H2 ZF 1517 1539
ENSRNOP00000056967 C2H2 ZF 1545 1567
ENSRNOP00000073072 C2H2 ZF 66 88
ENSRNOP00000073072 C2H2 ZF 97 119
ENSRNOP00000073072 C2H2 ZF 125 147
ENSRNOP00000073072 C2H2 ZF 643 665
ENSRNOP00000073072 C2H2 ZF 671 693
ENSRNOP00000073072 C2H2 ZF 699 722
ENSRNOP00000073072 C2H2 ZF 753 775
ENSRNOP00000073072 C2H2 ZF 790 813
ENSRNOP00000073072 C2H2 ZF 1248 1270
ENSRNOP00000073072 C2H2 ZF 1276 1299
ENSRNOP00000073072 C2H2 ZF 1571 1593
ENSRNOP00000073072 C2H2 ZF 1599 1621

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RREB1 Macaca mulatta ENSMMUG00000007852 I 0.827
RREB1 Otolemur garnettii ENSOGAG00000025755 N 0.827
RREB1 Homo sapiens ENSG00000124782 D 0.827
RREB1 Canis familiaris ENSCAFG00000009527 I 0.826
ENSAMEG00000017412 Ailuropoda melanoleuca ENSAMEG00000017412 I 0.825
ENSPANG00000019553 Papio anubis ENSPANG00000019553 I 0.823
RREB1 Gorilla gorilla ENSGGOG00000004561 I 0.823
Rreb1 Mus musculus ENSMUSG00000039087 I 0.823
ENSNLEG00000011554 Nomascus leucogenys ENSNLEG00000011554 I 0.823
ENSPPYG00000016204 Pongo abelii ENSPPYG00000016204 I 0.823
ENSCSAG00000007376 Chlorocebus sabaeus ENSCSAG00000007376 I 0.823
RREB1 Cavia porcellus ENSCPOG00000014380 N 0.823
ENSP00000369270 Macaca fascicularis ENSP00000369270 I 0.823
RREB1 Pan troglodytes ENSPTRG00000017697 I 0.823
ENSMPUG00000000558 Mustela putorius furo ENSMPUG00000000558 I 0.822
RREB1 Equus caballus ENSECAG00000018169 N 0.821
RREB1 Loxodonta africana ENSLAFG00000005300 I 0.821
RREB1 Myotis lucifugus ENSMLUG00000013153 N 0.820
Myotis_brandtii_RREB1_10008109 Myotis brandtii Myotis_brandtii_RREB1_10008109 N 0.820
Gfo_R006486 Geospiza fortis Gfo_R006486 N 0.819
RREB1 Taeniopygia guttata ENSTGUG00000002309 N 0.819
ENSAPLG00000004726 Anas platyrhynchos ENSAPLG00000004726 N 0.819
RREB1 Gallus gallus ENSGALG00000012799 N 0.819
Aan_R012638 Calypte anna Aan_R012638 N 0.819
Afo_R014721 Aptenodytes forsteri Afo_R014721 N 0.819
RREB1 Meleagris gallopavo ENSMGAG00000003910 N 0.819
ENSPSIG00000006582 Pelodiscus sinensis ENSPSIG00000006582 N 0.818
ENSSHAG00000005295 Sarcophilus harrisii ENSSHAG00000005295 N 0.816
RREB1 Felis catus ENSFCAG00000030069 I 0.814
RREB1 Ochotona princeps ENSOPRG00000001966 N 0.814
ENSFALG00000013231 Ficedula albicollis ENSFALG00000013231 N 0.814
RREB1 Monodelphis domestica ENSMODG00000009892 I 0.813
ENSMEUG00000015377 Macropus eugenii ENSMEUG00000015377 I 0.813
RREB1 Pteropus vampyrus ENSPVAG00000014081 I 0.813
Cmyd_10003405 Chelonia mydas Cmyd_10003405 I 0.799
RREB1 Anolis carolinensis ENSACAG00000000520 I 0.787