CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp213
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000021872
T109095_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Orthologous to human ZNF213 (zinc finger protein 213). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF213
M08284_2.00
Homo sapiens
CKCCGCCYGVKKTCK
MGAMMBCRGGCGGMG
ChIP-seq
Schmitges et al.(2016)
O14771_1-5.RCADE
0.811
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000038605
C2H2 ZF
247
269
HSCAQCGKRFRWGSDLARHQRTH
ENSRNOP00000038605
C2H2 ZF
275
297
HKCPECDKSFRSSSDLVRHQGVH
ENSRNOP00000038605
C2H2 ZF
303
325
FSCSECGKSFSRSAYLADHQRIH
ENSRNOP00000038605
C2H2 ZF
331
353
FSCTECGKSFSLRSYLLDHRRVH
ENSRNOP00000038605
C2H2 ZF
359
381
FGCGECDKSFKQRAHLIAHQSLH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy