csin108932 (Clonorchis sinensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 csin108932 T336130_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sox102F
M03981_2.00 		Drosophila melanogaster
ATTGTTCGGTGKN
NMCACCGAACAAT		 SELEX
Nitta et al.(2015)
Sox102F_1 		0.425 0.704
Sox102F
M03982_2.00 		Drosophila melanogaster
NAACAATDDCATTGTTN
NAACAATGHHATTGTTN		 SELEX
Nitta et al.(2015)
Sox102F_2 		0.425 0.704
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
csin108932 Sox 201 254

Links

Other Sox family TFs
Other Clonorchis sinensis TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
T265_14506 Opisthorchis viverrini T265_14506 I 0.670
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N 0.658
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.653
GPLIN_000596700 Globodera pallida GPLIN_000596700 I 0.629
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.628
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.628
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I 0.614
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I 0.614
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.611
sox-2 Caenorhabditis elegans WBGene00004949 I 0.586
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.586
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.586
AMEC000538 Anopheles melas AMEC000538 I 0.586
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.586
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I 0.580
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.577
SOX8 Equus caballus ENSECAG00000016320 I 0.564
ACOM029353 Anopheles coluzzii ACOM029353 I 0.558
MESCA012239 Megaselia scalaris MESCA012239 I 0.552
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I 0.551
CFIO01_04514 Colletotrichum fioriniae CFIO01_04514 N 0.548
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I 0.547
PDIP_33190 Penicillium digitatum PDIP_33190 N 0.542
PEX1_064750 Penicillium expansum PEX1_064750 N 0.542
PFICI_02946 Pestalotiopsis fici PFICI_02946 N 0.542
MESCA006364 Megaselia scalaris MESCA006364 N 0.532
RPRC001038 Rhodnius prolixus RPRC001038 N 0.532
ENSP00000322568 Macaca fascicularis ENSP00000322568 I 0.529
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N 0.527
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N 0.527
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.526
maker-nMf.1.1.scaf00287-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf00287-augustus-gene-0.13 I 0.521
TTAC_0001064401 Hydatigera taeniaeformis TTAC_0001064401 N 0.513
PXEA_0000763901 Protopolystoma xenopodis PXEA_0000763901 N 0.511
DRE_00029 Drechslerella stenobrocha DRE_00029 N 0.507
H072_9933 Dactylellina haptotyla H072_9933 N 0.507
GPLIN_001405800 Globodera pallida GPLIN_001405800 I 0.507
GLOINDRAFT_323774 Rhizophagus irregularis GLOINDRAFT_323774 N 0.505
A1O9_05704 Exophiala aquamarina A1O9_05704 N 0.503
AOL_s00081g337 Arthrobotrys oligospora AOL_s00081g337 N 0.500
SOX2 Felis catus ENSFCAG00000029205 I 0.500
SOX2 Procavia capensis ENSPCAG00000003690 I 0.500
sox13.S Xenopus laevis XB-GENE-865496 I 0.500
SERLA73DRAFT_139986 Serpula lacrymans SERLA73DRAFT_139986 N 0.498
e_gw.60.194.1 Branchiostoma floridae e_gw.60.194.1 N 0.498
gw.110.115.1 Branchiostoma floridae gw.110.115.1 N 0.496
MESCA006188 Megaselia scalaris MESCA006188 N 0.494
sox5.S Xenopus laevis XB-GENE-865667 I 0.494
XP_002935940 Xenopus tropicalis XP_002935940 N 0.490
CAA46605 Xenopus laevis CAA46605 N 0.488
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.475
XP_002170844.1 Hydra magnipapillata XP_002170844.1 I 0.475
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N 0.474
L798_12049 Zootermopsis nevadensis L798_12049 I 0.473
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.472
CAA46607 Xenopus laevis CAA46607 N 0.471
UCREL1_749 Eutypa lata UCREL1_749 N 0.469
CC1G_05598 Coprinopsis cinerea CC1G_05598 N 0.467
GYMLUDRAFT_143012 Gymnopus luxurians GYMLUDRAFT_143012 N 0.467
AMEM007694 Anopheles merus AMEM007694 N 0.466
HMEL002398 Heliconius melpomene HMEL002398 I 0.462
HMEL006651 Heliconius melpomene HMEL006651 I 0.462
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.461
Gfo_R006305 Geospiza fortis Gfo_R006305 I 0.459
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.457
UCREL1_469 Eutypa lata UCREL1_469 N 0.455
RPRC013413 Rhodnius prolixus RPRC013413 N 0.454
Brh_R008736 Buceros rhinoceros Brh_R008736 I 0.454
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.451
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N 0.448
D918_08317 Trichuris suis D918_08317 N 0.448
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.443
POSPLDRAFT_104634 Postia placenta POSPLDRAFT_104634 N 0.438
ENSAMXG00000003325 Astyanax mexicanus ENSAMXG00000003325 N 0.437
PTTG_00444 Puccinia triticina PTTG_00444 N 0.433
PPA25894 Pristionchus pacificus PPA25894 I 0.432
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.427
nAv.1.0.1.g07335 Acanthocheilonema viteae nAv.1.0.1.g07335 N 0.427
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.426
TELCIR_00631 Teladorsagia circumcincta TELCIR_00631 I 0.426
WUBG_01152 Wuchereria bancrofti WUBG_01152 I 0.425
ACEP25697 Atta cephalotes ACEP25697 I 0.425
ACYPI008847 Acyrthosiphon pisum ACYPI008847 I 0.425
BGIBMGA009439 Bombyx mori BGIBMGA009439 I 0.425
Bm5912 Brugia malayi Bm5912 I 0.425
CapteG26259 Capitella teleta CapteG26259 I 0.425
Sox102F Drosophila melanogaster FBgn0039938 D 0.425
Sox102F Drosophila simulans FBgn0061239 I 0.425
GA10800 Drosophila pseudoobscura FBgn0070856 I 0.425
GF20041 Drosophila ananassae FBgn0097048 I 0.425
GG16436 Drosophila erecta FBgn0108667 I 0.425
GH24007 Drosophila grimshawi FBgn0131463 I 0.425
GI14086 Drosophila mojavensis FBgn0136840 I 0.425
GL15612 Drosophila persimilis FBgn0153216 I 0.425
GM26768 Drosophila sechellia FBgn0181621 I 0.425
GJ16151 Drosophila virilis FBgn0203336 I 0.425
GK13587 Drosophila willistoni FBgn0215595 I 0.425
GE14503 Drosophila yakuba FBgn0232107 I 0.425
GB41464 Apis mellifera GB41464 I 0.425
HelroG148116 Helobdella robusta HelroG148116 I 0.425
HMEL008081 Heliconius melpomene HMEL008081 I 0.425
ISCW023359 Ixodes scapularis ISCW023359 I 0.425
KGM_12369 Danaus plexippus KGM_12369 I 0.425
L798_06009 Zootermopsis nevadensis L798_06009 I 0.425
LOAG_17406 Loa loa LOAG_17406 I 0.425
LotgiG121785 Lottia gigantea LotgiG121785 I 0.425
MCINX011158 Melitaea cinxia MCINX011158 I 0.425
NV17081 Nasonia vitripennis NV17081 I 0.425
PHUM095890 Pediculus humanus PHUM095890 I 0.425
Ppa-egl-13 Pristionchus pacificus PPA18718 I 0.425
SINV24752 Solenopsis invicta SINV24752 I 0.425
SMAR012049 Strigamia maritima SMAR012049 I 0.425
TC007419 Tribolium castaneum TC007419 I 0.425
WBGene00241896 Onchocerca volvulus WBGene00241896 I 0.425
YQE_00723 Dendroctonus ponderosae YQE_00723 I 0.425
YQE_01092 Dendroctonus ponderosae YQE_01092 I 0.425
Cflo_00400--XP_392414.3_APIME Camponotus floridanus Cflo_00400--XP_392414.3_APIME I 0.425
Hsal_00820--XP_001120983.1_APIME Harpegnathos saltator Hsal_00820--XP_001120983.1_APIME I 0.425
Ocbimv22009939m.g Octopus bimaculoides Ocbimv22009939m.g I 0.425
CLEC008310 Cimex lectularius CLEC008310 I 0.425
LCUP002303 Lucilia cuprina LCUP002303 I 0.425
LDEC003820 Leptinotarsa decemlineata LDEC003820 I 0.425
BGLB012549 Biomphalaria glabrata BGLB012549 I 0.425
MDOA015569 Musca domestica MDOA015569 I 0.425
ASU_03729 Ascaris suum ASU_03729 I 0.425
BXY_1610900 Bursaphelenchus xylophilus BXY_1610900 I 0.425
EEL_0000990601 Elaeophora elaphi EEL_0000990601 I 0.425
EVEC_0000027701 Enterobius vermicularis EVEC_0000027701 I 0.425
Hba_18920 Heterorhabditis bacteriophora Hba_18920 I 0.425
nAv.1.0.1.g05485 Acanthocheilonema viteae nAv.1.0.1.g05485 I 0.425
nDi.2.2.2.g02312 Dirofilaria immitis nDi.2.2.2.g02312 I 0.425
nLs.2.1.2.g06545 Litomosoides sigmodontis nLs.2.1.2.g06545 I 0.425
nOo.2.0.1.g02512 Onchocerca ochengi nOo.2.0.1.g02512 I 0.425
scaffold4-EXSNAP2012.18 Pristionchus exspectatus scaffold4-EXSNAP2012.18 I 0.425
SMUV_0000354401 Syphacia muris SMUV_0000354401 I 0.425
TCNE_0000724501 Toxocara canis TCNE_0000724501 I 0.425
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.424
L596_g12387 Steinernema carpocapsae L596_g12387 I 0.421
L889_g29948 Steinernema feltiae L889_g29948 I 0.421
L892_g2830 Steinernema scapterisci L892_g2830 I 0.421
L893_g3677 Steinernema glaseri L893_g3677 I 0.421
L898_g20001 Steinernema monticolum L898_g20001 I 0.421
nRc.2.0.1.g07393 Romanomermis culicivorax nRc.2.0.1.g07393 I 0.421
PTRK_0000206000 Parastrongyloides trichosuri PTRK_0000206000 I 0.421
RSKR_0000861000 Rhabditophanes kr3021 RSKR_0000861000 I 0.421
SPAL_0001184600 Strongyloides papillosus SPAL_0001184600 I 0.421
SSTP_0000859500 Strongyloides stercoralis SSTP_0000859500 I 0.421
SVE_0106200 Strongyloides venezuelensis SVE_0106200 I 0.421
PLICRDRAFT_78649 Plicaturopsis crispa PLICRDRAFT_78649 N 0.420
CGI_10012168 Crassostrea gigas CGI_10012168 I 0.419
CNM02020 Cryptococcus neoformans CNM02020 N 0.419
KGM_19696 Danaus plexippus KGM_19696 I 0.418
D915_11240 Fasciola hepatica D915_11240 N 0.418
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.417
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N 0.416